PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pvir02NG0015130.1 Flavonoid IFR low borderline
Pvir02NG0015130.2 Flavonoid IFR low borderline
Pvir02NG0019550.1 Flavonoid IFR low borderline
Pvir02NG0019550.2 Flavonoid IFR low borderline
Pvir02NG0020470.1 Flavonoid IFR low borderline
Pvir02NG0032070.1 Flavonoid IFR low borderline
Pvir02NG0047820.1 Flavonoid IFR low borderline
Pvir03KG0009190.1 Flavonoid IFR low borderline
Pvir03KG0016180.1 Flavonoid IFR low borderline
Pvir03KG0016180.2 Flavonoid IFR low borderline
Pvir03KG0033450.1 Flavonoid IFR low borderline
Pvir03KG0037750.1 Flavonoid IFR high pass
Pvir03KG0037750.2 Flavonoid IFR high pass
Pvir03KG0037750.3 Flavonoid IFR high pass
Pvir03KG0037750.4 Flavonoid IFR high pass
Pvir03KG0037750.5 Flavonoid IFR high pass
Pvir03KG0037750.6 Flavonoid IFR high pass
Pvir03KG0037770.1 Flavonoid IFR high pass
Pvir03KG0037780.1 Flavonoid IFR high pass
Pvir03KG0039120.1 Flavonoid IFR low borderline
Pvir03KG0039120.2 Flavonoid IFR low borderline
Pvir03NG0008260.1 Flavonoid IFR low borderline
Pvir03NG0014730.1 Flavonoid IFR low borderline
Pvir03NG0031270.1 Flavonoid IFR low borderline
Pvir03NG0031270.2 Flavonoid IFR low borderline
Pvir03NG0034760.1 Flavonoid IFR high pass
Pvir03NG0034760.2 Flavonoid IFR high pass
Pvir03NG0034760.3 Flavonoid IFR high pass
Pvir03NG0034760.4 Flavonoid IFR high pass
Pvir03NG0034760.5 Flavonoid IFR high pass
Pvir03NG0034760.6 Flavonoid IFR high pass
Pvir03NG0034770.1 Flavonoid IFR high pass
Pvir03NG0035960.1 Flavonoid IFR low borderline
Pvir03NG0035960.2 Flavonoid IFR low borderline
Pvir03NG0035960.3 Flavonoid IFR low borderline
Pvir03NG0035960.4 Flavonoid IFR low borderline
Pvir03NG0035960.6 Flavonoid IFR low borderline
Pvir03NG0035960.7 Flavonoid IFR low borderline
Pvir03NG0035960.8 Flavonoid IFR low borderline
Pvir03NG0035960.9 Flavonoid IFR low borderline
Pvir03NG0048350.1 Flavonoid IFR high pass
Pvir04KG0013200.1 Flavonoid IFR low borderline
Pvir04KG0013200.2 Flavonoid IFR low borderline
Pvir04KG0016150.1 Flavonoid IFR high pass
Pvir04KG0017330.1 Flavonoid IFR high pass
Pvir04KG0017330.2 Flavonoid IFR high pass
Pvir04KG0033820.1 Flavonoid IFR low borderline
Pvir04NG0012090.1 Flavonoid IFR low borderline
Pvir04NG0030390.1 Flavonoid IFR low borderline
Pvir05KG0011000.1 Flavonoid IFR medium pass