PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pvir05KG0011010.1 Flavonoid IFR high pass
Pvir05KG0011020.1 Flavonoid IFR high pass
Pvir05KG0011020.2 Flavonoid IFR high pass
Pvir05KG0011020.3 Flavonoid IFR high pass
Pvir05KG0011020.4 Flavonoid IFR high pass
Pvir05KG0011020.5 Flavonoid IFR high pass
Pvir05KG0011020.6 Flavonoid IFR high pass
Pvir05KG0017020.1 Flavonoid IFR low borderline
Pvir05KG0017020.2 Flavonoid IFR low borderline
Pvir05KG0023360.1 Flavonoid IFR medium pass
Pvir05KG0023360.2 Flavonoid IFR medium pass
Pvir05KG0023360.3 Flavonoid IFR medium pass
Pvir05KG0023360.4 Flavonoid IFR medium pass
Pvir05KG0044560.1 Flavonoid IFR low borderline
Pvir05NG0010940.1 Flavonoid IFR high pass
Pvir05NG0010950.1 Flavonoid IFR high pass
Pvir05NG0010950.2 Flavonoid IFR high pass
Pvir05NG0010960.1 Flavonoid IFR high pass
Pvir05NG0010960.2 Flavonoid IFR high pass
Pvir05NG0010960.3 Flavonoid IFR high pass
Pvir05NG0010960.4 Flavonoid IFR high pass
Pvir05NG0016470.1 Flavonoid IFR low borderline
Pvir05NG0016470.2 Flavonoid IFR low borderline
Pvir05NG0021830.1 Flavonoid IFR high pass
Pvir05NG0021830.2 Flavonoid IFR medium pass
Pvir05NG0043810.1 Flavonoid IFR low borderline
Pvir06KG0004980.1 Flavonoid IFR low borderline
Pvir06KG0004980.2 Flavonoid IFR low borderline
Pvir06KG0031080.1 Flavonoid IFR medium pass
Pvir06KG0031420.1 Flavonoid IFR low borderline
Pvir06KG0031420.6 Flavonoid IFR low borderline
Pvir06NG0005080.1 Flavonoid IFR low borderline
Pvir06NG0005080.2 Flavonoid IFR low borderline
Pvir06NG0005080.3 Flavonoid IFR low borderline
Pvir06NG0005080.4 Flavonoid IFR low borderline
Pvir06NG0005080.5 Flavonoid IFR low borderline
Pvir06NG0029850.1 Flavonoid IFR medium pass
Pvir07KG0013150.1 Flavonoid IFR low borderline
Pvir07KG0013210.1 Flavonoid IFR low borderline
Pvir07NG0011330.1 Flavonoid IFR low borderline
Pvir07NG0011430.1 Flavonoid IFR low borderline
Pvir09KG0003090.1 Flavonoid IFR low borderline
Pvir09KG0003090.2 Flavonoid IFR low borderline
Pvir09KG0027080.1 Flavonoid IFR low borderline
Pvir09KG0027080.2 Flavonoid IFR low borderline
Pvir09KG0027080.3 Flavonoid IFR low borderline
Pvir09KG0027080.4 Flavonoid IFR low borderline
Pvir09KG0027080.5 Flavonoid IFR low borderline
Pvir09KG0027080.6 Flavonoid IFR low borderline
Pvir09KG0043540.1 Flavonoid IFR low borderline