PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pvir09KG0043540.2 Flavonoid IFR low borderline
Pvir09KG0043950.1 Flavonoid IFR medium pass
Pvir09KG0048710.1 Flavonoid IFR low borderline
Pvir09KG0056310.1 Flavonoid IFR medium borderline
Pvir09KG0056350.1 Flavonoid IFR low borderline
Pvir09NG0003130.1 Flavonoid IFR low borderline
Pvir09NG0003130.2 Flavonoid IFR low borderline
Pvir09NG0026790.1 Flavonoid IFR low borderline
Pvir09NG0026790.2 Flavonoid IFR low borderline
Pvir09NG0026790.3 Flavonoid IFR low borderline
Pvir09NG0026790.4 Flavonoid IFR low borderline
Pvir09NG0026790.5 Flavonoid IFR low borderline
Pvir09NG0042980.1 Flavonoid IFR low borderline
Pvir09NG0042980.2 Flavonoid IFR low borderline
Pvir09NG0043330.1 Flavonoid IFR medium pass
Pvir09NG0048350.1 Flavonoid IFR low borderline
Pvir09NG0055800.1 Flavonoid IFR medium borderline
Pvir09NG0055810.1 Flavonoid IFR low borderline
Pvir09NG0055810.2 Flavonoid IFR low borderline
Pvir01KG0006430.1 Flavonoid IFS low borderline
Pvir01KG0007710.1 Flavonoid IFS medium borderline
Pvir01KG0007770.1 Flavonoid IFS medium borderline
Pvir01KG0007780.1 Flavonoid IFS medium borderline
Pvir01KG0010630.1 Flavonoid IFS low borderline
Pvir01KG0024350.1 Flavonoid IFS low borderline
Pvir01KG0024370.1 Flavonoid IFS low borderline
Pvir01KG0024390.1 Flavonoid IFS low borderline
Pvir01KG0024560.1 Flavonoid IFS medium borderline
Pvir01KG0025000.1 Flavonoid IFS low borderline
Pvir01KG0025050.1 Flavonoid IFS medium borderline
Pvir01KG0025050.2 Flavonoid IFS medium borderline
Pvir01KG0025060.1 Flavonoid IFS medium borderline
Pvir01KG0030840.1 Flavonoid IFS medium borderline
Pvir01KG0032300.1 Flavonoid IFS low borderline
Pvir01KG0035330.1 Flavonoid IFS low borderline
Pvir01KG0044330.1 Flavonoid IFS low borderline
Pvir01NG0005600.1 Flavonoid IFS low borderline
Pvir01NG0006890.1 Flavonoid IFS medium borderline
Pvir01NG0006900.1 Flavonoid IFS medium borderline
Pvir01NG0023970.1 Flavonoid IFS medium borderline
Pvir01NG0024330.1 Flavonoid IFS medium borderline
Pvir01NG0024400.1 Flavonoid IFS medium borderline
Pvir01NG0024470.1 Flavonoid IFS medium borderline
Pvir01NG0025460.1 Flavonoid IFS medium borderline
Pvir01NG0031560.1 Flavonoid IFS low borderline
Pvir01NG0034070.1 Flavonoid IFS low borderline
Pvir01NG0034070.2 Flavonoid IFS low borderline
Pvir01NG0034070.3 Flavonoid IFS low borderline
Pvir01NG0034070.4 Flavonoid IFS low borderline
Pvir01NG0034070.5 Flavonoid IFS low borderline