PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pvir03NG0035740.1 Alkaloid GES medium pass
Pvir03NG0035750.1 Alkaloid GES medium pass
Pvir03NG0035750.2 Alkaloid GES medium pass
Pvir03NG0035760.1 Alkaloid GES medium pass
Pvir03NG0036760.1 Alkaloid GES medium pass
Pvir03NG0036780.1 Alkaloid GES medium pass
Pvir03NG0036780.2 Alkaloid GES medium pass
Pvir03NG0036840.1 Alkaloid GES medium pass
Pvir03NG0036980.1 Alkaloid GES medium pass
Pvir03NG0040430.1 Alkaloid GES medium pass
Pvir03NG0040430.2 Alkaloid GES medium pass
Pvir03NG0040440.1 Alkaloid GES medium pass
Pvir03NG0040460.1 Alkaloid GES medium pass
Pvir03NG0040460.2 Alkaloid GES medium pass
Pvir03NG0040460.3 Alkaloid GES medium pass
Pvir03NG0040510.1 Alkaloid GES low borderline
Pvir05KG0018170.1 Alkaloid GES medium pass
Pvir05KG0031810.1 Alkaloid GES low borderline
Pvir05NG0011320.1 Alkaloid GES low borderline
Pvir05NG0011320.2 Alkaloid GES low borderline
Pvir05NG0011320.3 Alkaloid GES low borderline
Pvir05NG0011320.4 Alkaloid GES low borderline
Pvir05NG0011320.5 Alkaloid GES low borderline
Pvir05NG0046080.1 Alkaloid GES medium pass
Pvir06KG0003880.1 Alkaloid GES medium pass
Pvir06KG0003900.1 Alkaloid GES low borderline
Pvir06KG0006200.1 Alkaloid GES medium pass
Pvir06KG0006240.1 Alkaloid GES medium pass
Pvir06KG0006300.1 Alkaloid GES medium pass
Pvir06KG0009260.1 Alkaloid GES medium pass
Pvir06KG0009260.2 Alkaloid GES medium pass
Pvir06KG0009260.3 Alkaloid GES medium pass
Pvir06KG0009260.4 Alkaloid GES medium pass
Pvir06KG0009260.5 Alkaloid GES medium pass
Pvir06KG0009350.2 Alkaloid GES low borderline
Pvir06KG0018570.1 Alkaloid GES low borderline
Pvir06NG0003910.1 Alkaloid GES low borderline
Pvir06NG0003910.2 Alkaloid GES low borderline
Pvir06NG0003980.1 Alkaloid GES medium pass
Pvir06NG0006580.1 Alkaloid GES medium pass
Pvir06NG0006580.2 Alkaloid GES low borderline
Pvir06NG0006600.1 Alkaloid GES medium pass
Pvir06NG0006610.1 Alkaloid GES low borderline
Pvir06NG0006620.1 Alkaloid GES medium pass
Pvir06NG0008820.1 Alkaloid GES low borderline
Pvir06NG0010660.1 Alkaloid GES medium pass
Pvir06NG0010660.2 Alkaloid GES medium pass
Pvir06NG0010660.3 Alkaloid GES medium pass
Pvir06NG0018850.1 Alkaloid GES medium pass
Pvir06NG0018850.2 Alkaloid GES medium pass