PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pvir06NG0020170.5 Phenylpropanoid CCR low borderline
Pvir06NG0025810.1 Phenylpropanoid CCR medium borderline
Pvir07KG0019810.1 Phenylpropanoid CCR medium borderline
Pvir07KG0032100.1 Phenylpropanoid CCR medium borderline
Pvir07KG0032110.1 Phenylpropanoid CCR medium borderline
Pvir07KG0032110.2 Phenylpropanoid CCR medium borderline
Pvir07KG0032110.3 Phenylpropanoid CCR medium borderline
Pvir07KG0032120.1 Phenylpropanoid CCR medium pass
Pvir07KG0032120.2 Phenylpropanoid CCR medium pass
Pvir07KG0032140.1 Phenylpropanoid CCR medium borderline
Pvir07KG0032160.1 Phenylpropanoid CCR medium borderline
Pvir07NG0017900.1 Phenylpropanoid CCR medium borderline
Pvir07NG0030410.1 Phenylpropanoid CCR medium borderline
Pvir07NG0030430.1 Phenylpropanoid CCR medium borderline
Pvir07NG0030430.2 Phenylpropanoid CCR medium borderline
Pvir07NG0030440.1 Phenylpropanoid CCR medium borderline
Pvir07NG0030450.1 Phenylpropanoid CCR medium borderline
Pvir08KG0026970.1 Phenylpropanoid CCR medium borderline
Pvir08KG0026970.2 Phenylpropanoid CCR medium borderline
Pvir08NG0011130.1 Phenylpropanoid CCR medium borderline
Pvir09KG0003480.3 Phenylpropanoid CCR medium borderline
Pvir09KG0003480.4 Phenylpropanoid CCR medium borderline
Pvir09KG0034170.1 Phenylpropanoid CCR medium pass
Pvir09KG0043950.1 Phenylpropanoid CCR low borderline
Pvir09NG0003540.1 Phenylpropanoid CCR medium pass
Pvir09NG0003540.2 Phenylpropanoid CCR medium pass
Pvir09NG0003540.3 Phenylpropanoid CCR medium pass
Pvir09NG0003540.4 Phenylpropanoid CCR medium pass
Pvir09NG0033230.1 Phenylpropanoid CCR medium borderline
Pvir09NG0033230.2 Phenylpropanoid CCR medium borderline
Pvir09NG0033230.3 Phenylpropanoid CCR medium borderline
Pvir09NG0043330.1 Phenylpropanoid CCR low borderline
Pvir01NG0026690.1 Phenylpropanoid CCoAOMT low borderline
Pvir02KG0031180.1 Phenylpropanoid CCoAOMT medium pass
Pvir02KG0031180.2 Phenylpropanoid CCoAOMT medium pass
Pvir02KG0031180.3 Phenylpropanoid CCoAOMT medium pass
Pvir02NG0020640.1 Phenylpropanoid CCoAOMT medium pass
Pvir02NG0028440.1 Phenylpropanoid CCoAOMT medium pass
Pvir04KG0005780.1 Phenylpropanoid CCoAOMT medium pass
Pvir04NG0005040.1 Phenylpropanoid CCoAOMT medium pass
Pvir04NG0005040.2 Phenylpropanoid CCoAOMT medium pass
Pvir06KG0005040.1 Phenylpropanoid CCoAOMT medium pass
Pvir06KG0025330.1 Phenylpropanoid CCoAOMT medium pass
Pvir06KG0025330.2 Phenylpropanoid CCoAOMT medium pass
Pvir06KG0025340.1 Phenylpropanoid CCoAOMT medium pass
Pvir06KG0025350.1 Phenylpropanoid CCoAOMT medium pass
Pvir06NG0005140.1 Phenylpropanoid CCoAOMT medium pass
Pvir06NG0005140.2 Phenylpropanoid CCoAOMT medium pass
Pvir06NG0005140.3 Phenylpropanoid CCoAOMT medium pass
Pvir06NG0005140.4 Phenylpropanoid CCoAOMT medium pass