PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
Pvir06NG0024000.1 Phenylpropanoid CCoAOMT medium pass
Pvir06NG0024000.2 Phenylpropanoid CCoAOMT medium pass
Pvir06NG0024000.3 Phenylpropanoid CCoAOMT medium pass
Pvir06NG0024010.1 Phenylpropanoid CCoAOMT medium pass
Pvir06NG0024010.2 Phenylpropanoid CCoAOMT medium pass
Pvir06NG0024010.3 Phenylpropanoid CCoAOMT medium pass
Pvir06NG0024020.1 Phenylpropanoid CCoAOMT medium pass
Pvir01KG0009360.1 Phenylpropanoid COMT low borderline
Pvir01KG0009370.1 Phenylpropanoid COMT low borderline
Pvir01KG0044850.1 Phenylpropanoid COMT medium pass
Pvir01NG0008500.1 Phenylpropanoid COMT low borderline
Pvir01NG0008510.1 Phenylpropanoid COMT low borderline
Pvir02KG0045430.1 Phenylpropanoid COMT medium pass
Pvir02NG0009620.1 Phenylpropanoid COMT low borderline
Pvir02NG0010270.1 Phenylpropanoid COMT low borderline
Pvir02NG0042180.1 Phenylpropanoid COMT medium pass
Pvir03KG0022730.1 Phenylpropanoid COMT medium pass
Pvir03KG0022750.1 Phenylpropanoid COMT medium pass
Pvir03KG0022760.1 Phenylpropanoid COMT medium pass
Pvir03KG0022780.1 Phenylpropanoid COMT medium pass
Pvir03KG0051230.1 Phenylpropanoid COMT low borderline
Pvir03NG0021230.1 Phenylpropanoid COMT medium pass
Pvir03NG0021240.1 Phenylpropanoid COMT medium pass
Pvir03NG0021240.2 Phenylpropanoid COMT medium pass
Pvir03NG0021280.1 Phenylpropanoid COMT medium pass
Pvir03NG0032960.1 Phenylpropanoid COMT low borderline
Pvir03NG0035800.1 Phenylpropanoid COMT medium pass
Pvir03NG0035800.2 Phenylpropanoid COMT medium pass
Pvir03NG0046990.1 Phenylpropanoid COMT low borderline
Pvir05KG0004540.1 Phenylpropanoid COMT medium pass
Pvir05KG0038280.1 Phenylpropanoid COMT low borderline
Pvir05NG0011730.1 Phenylpropanoid COMT low borderline
Pvir05NG0011730.2 Phenylpropanoid COMT low borderline
Pvir05NG0032980.1 Phenylpropanoid COMT medium pass
Pvir05NG0037460.1 Phenylpropanoid COMT low borderline
Pvir06KG0005420.1 Phenylpropanoid COMT medium pass
Pvir06KG0005420.2 Phenylpropanoid COMT medium pass
Pvir06KG0005420.3 Phenylpropanoid COMT medium pass
Pvir06KG0005420.4 Phenylpropanoid COMT medium pass
Pvir06KG0005420.5 Phenylpropanoid COMT medium pass
Pvir06KG0005420.6 Phenylpropanoid COMT medium pass
Pvir06KG0005420.7 Phenylpropanoid COMT medium pass
Pvir06KG0005420.8 Phenylpropanoid COMT medium pass
Pvir06KG0023030.1 Phenylpropanoid COMT low borderline
Pvir06NG0005560.1 Phenylpropanoid COMT medium pass
Pvir06NG0005560.2 Phenylpropanoid COMT medium pass
Pvir06NG0005560.3 Phenylpropanoid COMT medium pass
Pvir06NG0005560.4 Phenylpropanoid COMT medium pass
Pvir06NG0019080.1 Phenylpropanoid COMT low borderline
Pvir07KG0006590.1 Phenylpropanoid COMT medium pass