PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pvir06NG0011950.1 Rosmarinic Acid 4CL medium pass
Pvir06NG0011950.2 Rosmarinic Acid 4CL medium pass
Pvir06NG0011950.3 Rosmarinic Acid 4CL medium pass
Pvir06NG0014820.1 Rosmarinic Acid 4CL medium pass
Pvir06NG0020610.1 Rosmarinic Acid 4CL medium pass
Pvir07KG0008100.1 Rosmarinic Acid 4CL medium pass
Pvir07KG0008100.2 Rosmarinic Acid 4CL medium pass
Pvir07KG0008870.1 Rosmarinic Acid 4CL medium pass
Pvir07KG0013330.1 Rosmarinic Acid 4CL low borderline
Pvir07KG0013330.2 Rosmarinic Acid 4CL low borderline
Pvir07KG0035870.1 Rosmarinic Acid 4CL medium pass
Pvir07KG0036590.1 Rosmarinic Acid 4CL medium pass
Pvir07KG0036590.2 Rosmarinic Acid 4CL medium pass
Pvir07NG0008580.1 Rosmarinic Acid 4CL medium pass
Pvir07NG0008580.2 Rosmarinic Acid 4CL medium pass
Pvir07NG0011610.1 Rosmarinic Acid 4CL low borderline
Pvir07NG0011610.2 Rosmarinic Acid 4CL low borderline
Pvir07NG0011610.3 Rosmarinic Acid 4CL low borderline
Pvir07NG0034220.1 Rosmarinic Acid 4CL medium pass
Pvir07NG0034240.1 Rosmarinic Acid 4CL medium pass
Pvir07NG0035090.1 Rosmarinic Acid 4CL medium pass
Pvir07NG0035090.2 Rosmarinic Acid 4CL medium pass
Pvir08KG0003290.1 Rosmarinic Acid 4CL low borderline
Pvir08KG0006010.1 Rosmarinic Acid 4CL low borderline
Pvir08KG0006300.1 Rosmarinic Acid 4CL low borderline
Pvir08KG0012990.1 Rosmarinic Acid 4CL medium pass
Pvir08KG0012990.2 Rosmarinic Acid 4CL medium pass
Pvir08KG0012990.3 Rosmarinic Acid 4CL medium pass
Pvir08KG0012990.4 Rosmarinic Acid 4CL medium pass
Pvir08KG0013310.1 Rosmarinic Acid 4CL medium pass
Pvir08KG0022560.1 Rosmarinic Acid 4CL low borderline
Pvir08KG0022560.2 Rosmarinic Acid 4CL low borderline
Pvir08KG0022560.3 Rosmarinic Acid 4CL low borderline
Pvir08KG0022560.4 Rosmarinic Acid 4CL low borderline
Pvir08KG0022560.5 Rosmarinic Acid 4CL low borderline
Pvir08KG0022560.6 Rosmarinic Acid 4CL low borderline
Pvir08NG0004160.1 Rosmarinic Acid 4CL low borderline
Pvir08NG0011170.1 Rosmarinic Acid 4CL medium pass
Pvir08NG0018670.1 Rosmarinic Acid 4CL low borderline
Pvir09KG0001390.1 Rosmarinic Acid 4CL low borderline
Pvir09KG0001390.2 Rosmarinic Acid 4CL low borderline
Pvir09KG0019380.1 Rosmarinic Acid 4CL medium pass
Pvir09KG0019390.1 Rosmarinic Acid 4CL medium pass
Pvir09KG0019580.1 Rosmarinic Acid 4CL medium pass
Pvir09KG0033830.1 Rosmarinic Acid 4CL medium pass
Pvir09KG0042880.1 Rosmarinic Acid 4CL low borderline
Pvir09KG0046980.1 Rosmarinic Acid 4CL medium pass
Pvir09KG0046980.2 Rosmarinic Acid 4CL medium pass
Pvir09KG0046990.1 Rosmarinic Acid 4CL medium pass
Pvir09KG0058700.1 Rosmarinic Acid 4CL medium pass