PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pvir09KG0058700.2 Rosmarinic Acid 4CL medium pass
Pvir09KG0058710.1 Rosmarinic Acid 4CL medium pass
Pvir09KG0060260.1 Rosmarinic Acid 4CL medium pass
Pvir09KG0060270.1 Rosmarinic Acid 4CL medium pass
Pvir09KG0060390.1 Rosmarinic Acid 4CL medium pass
Pvir09KG0060660.1 Rosmarinic Acid 4CL medium pass
Pvir09NG0001320.1 Rosmarinic Acid 4CL low borderline
Pvir09NG0019460.1 Rosmarinic Acid 4CL medium pass
Pvir09NG0019500.1 Rosmarinic Acid 4CL medium pass
Pvir09NG0019710.1 Rosmarinic Acid 4CL medium pass
Pvir09NG0032910.1 Rosmarinic Acid 4CL medium pass
Pvir09NG0046760.1 Rosmarinic Acid 4CL medium pass
Pvir09NG0046760.2 Rosmarinic Acid 4CL medium pass
Pvir09NG0058530.1 Rosmarinic Acid 4CL medium pass
Pvir09NG0058530.2 Rosmarinic Acid 4CL medium pass
Pvir09NG0060090.1 Rosmarinic Acid 4CL medium pass
Pvir09NG0060090.2 Rosmarinic Acid 4CL medium pass
Pvir09NG0060180.1 Rosmarinic Acid 4CL medium pass
Pvir09NG0060180.2 Rosmarinic Acid 4CL medium pass
Pvir09NG0060400.1 Rosmarinic Acid 4CL medium pass
Pvir01KG0006430.1 Rosmarinic Acid C4H low borderline
Pvir01KG0007690.1 Rosmarinic Acid C4H medium pass
Pvir01KG0007700.1 Rosmarinic Acid C4H low borderline
Pvir01KG0007700.2 Rosmarinic Acid C4H low borderline
Pvir01KG0007700.3 Rosmarinic Acid C4H low borderline
Pvir01KG0007710.1 Rosmarinic Acid C4H medium pass
Pvir01KG0007720.1 Rosmarinic Acid C4H medium pass
Pvir01KG0007770.1 Rosmarinic Acid C4H low borderline
Pvir01KG0007780.1 Rosmarinic Acid C4H low borderline
Pvir01KG0009680.1 Rosmarinic Acid C4H low borderline
Pvir01KG0009680.2 Rosmarinic Acid C4H low borderline
Pvir01KG0010630.1 Rosmarinic Acid C4H low borderline
Pvir01KG0011360.1 Rosmarinic Acid C4H low borderline
Pvir01KG0011360.2 Rosmarinic Acid C4H low borderline
Pvir01KG0011360.3 Rosmarinic Acid C4H low borderline
Pvir01KG0014390.1 Rosmarinic Acid C4H low borderline
Pvir01KG0019290.1 Rosmarinic Acid C4H medium pass
Pvir01KG0021210.1 Rosmarinic Acid C4H medium pass
Pvir01KG0024560.1 Rosmarinic Acid C4H low borderline
Pvir01KG0025050.1 Rosmarinic Acid C4H low borderline
Pvir01KG0025050.2 Rosmarinic Acid C4H low borderline
Pvir01KG0025060.1 Rosmarinic Acid C4H low borderline
Pvir01KG0030840.1 Rosmarinic Acid C4H low borderline
Pvir01KG0035330.1 Rosmarinic Acid C4H low borderline
Pvir01KG0044910.1 Rosmarinic Acid C4H low borderline
Pvir01NG0000550.1 Rosmarinic Acid C4H low borderline
Pvir01NG0000550.2 Rosmarinic Acid C4H low borderline
Pvir01NG0005600.1 Rosmarinic Acid C4H low borderline
Pvir01NG0006770.1 Rosmarinic Acid C4H medium pass
Pvir01NG0006890.1 Rosmarinic Acid C4H low borderline