PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pvir01NG0006890.2 Rosmarinic Acid C4H low borderline
Pvir01NG0006900.1 Rosmarinic Acid C4H medium pass
Pvir01NG0008890.1 Rosmarinic Acid C4H low borderline
Pvir01NG0010120.1 Rosmarinic Acid C4H low borderline
Pvir01NG0010120.2 Rosmarinic Acid C4H low borderline
Pvir01NG0013060.1 Rosmarinic Acid C4H low borderline
Pvir01NG0014810.1 Rosmarinic Acid C4H low borderline
Pvir01NG0018420.1 Rosmarinic Acid C4H medium pass
Pvir01NG0019740.1 Rosmarinic Acid C4H low borderline
Pvir01NG0019890.1 Rosmarinic Acid C4H low borderline
Pvir01NG0019900.1 Rosmarinic Acid C4H medium pass
Pvir01NG0019900.2 Rosmarinic Acid C4H medium pass
Pvir01NG0023970.1 Rosmarinic Acid C4H low borderline
Pvir01NG0024330.1 Rosmarinic Acid C4H low borderline
Pvir01NG0024400.1 Rosmarinic Acid C4H low borderline
Pvir01NG0024470.1 Rosmarinic Acid C4H low borderline
Pvir01NG0025460.1 Rosmarinic Acid C4H low borderline
Pvir01NG0030140.1 Rosmarinic Acid C4H low borderline
Pvir01NG0034070.1 Rosmarinic Acid C4H low borderline
Pvir01NG0034070.2 Rosmarinic Acid C4H low borderline
Pvir01NG0034070.3 Rosmarinic Acid C4H low borderline
Pvir01NG0042760.1 Rosmarinic Acid C4H low borderline
Pvir01NG0042760.2 Rosmarinic Acid C4H low borderline
Pvir01NG0043330.1 Rosmarinic Acid C4H low borderline
Pvir02KG0004800.1 Rosmarinic Acid C4H medium pass
Pvir02KG0004820.1 Rosmarinic Acid C4H medium pass
Pvir02KG0004840.1 Rosmarinic Acid C4H medium pass
Pvir02KG0004880.1 Rosmarinic Acid C4H medium pass
Pvir02KG0004910.1 Rosmarinic Acid C4H medium pass
Pvir02KG0004920.1 Rosmarinic Acid C4H medium pass
Pvir02KG0007610.1 Rosmarinic Acid C4H low borderline
Pvir02KG0007620.1 Rosmarinic Acid C4H low borderline
Pvir02KG0013790.1 Rosmarinic Acid C4H low borderline
Pvir02KG0018070.1 Rosmarinic Acid C4H medium pass
Pvir02KG0018070.2 Rosmarinic Acid C4H medium pass
Pvir02KG0020950.1 Rosmarinic Acid C4H medium pass
Pvir02KG0020950.2 Rosmarinic Acid C4H low borderline
Pvir02KG0020980.1 Rosmarinic Acid C4H low borderline
Pvir02KG0020980.2 Rosmarinic Acid C4H low borderline
Pvir02KG0023340.1 Rosmarinic Acid C4H low borderline
Pvir02KG0024930.1 Rosmarinic Acid C4H low borderline
Pvir02KG0025680.1 Rosmarinic Acid C4H low borderline
Pvir02KG0025890.1 Rosmarinic Acid C4H low borderline
Pvir02KG0025890.2 Rosmarinic Acid C4H low borderline
Pvir02KG0026580.1 Rosmarinic Acid C4H low borderline
Pvir02KG0028060.1 Rosmarinic Acid C4H medium pass
Pvir02KG0028070.1 Rosmarinic Acid C4H medium pass
Pvir02KG0028080.1 Rosmarinic Acid C4H medium pass
Pvir02KG0028090.1 Rosmarinic Acid C4H low borderline
Pvir02KG0028100.1 Rosmarinic Acid C4H low borderline