PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pvir05KG0001000.1 Alkaloid IO medium borderline
Pvir05KG0013040.1 Alkaloid IO medium borderline
Pvir05KG0013050.1 Alkaloid IO medium borderline
Pvir05KG0042020.1 Alkaloid IO medium borderline
Pvir05NG0012910.1 Alkaloid IO medium borderline
Pvir05NG0033240.1 Alkaloid IO medium borderline
Pvir05NG0033240.2 Alkaloid IO medium borderline
Pvir06KG0023720.1 Alkaloid IO medium borderline
Pvir06NG0003590.2 Alkaloid IO medium borderline
Pvir06NG0022170.1 Alkaloid IO medium borderline
Pvir06NG0029310.1 Alkaloid IO medium borderline
Pvir06NG0029310.3 Alkaloid IO medium borderline
Pvir06NG0029310.4 Alkaloid IO medium borderline
Pvir07KG0027320.6 Alkaloid IO medium borderline
Pvir08KG0011200.1 Alkaloid IO medium borderline
Pvir09KG0019300.1 Alkaloid IO medium pass
Pvir09KG0019310.1 Alkaloid IO medium pass
Pvir09KG0031480.3 Alkaloid IO medium borderline
Pvir09KG0043070.1 Alkaloid IO medium borderline
Pvir09KG0048450.1 Alkaloid IO medium borderline
Pvir09KG0052430.1 Alkaloid IO low borderline
Pvir09KG0052430.3 Alkaloid IO low borderline
Pvir09KG0059740.1 Alkaloid IO low borderline
Pvir09KG0060220.1 Alkaloid IO medium borderline
Pvir09NG0019370.1 Alkaloid IO medium pass
Pvir09NG0038950.2 Alkaloid IO low borderline
Pvir09NG0042470.1 Alkaloid IO medium borderline
Pvir09NG0052000.3 Alkaloid IO low borderline
Pvir09NG0052000.4 Alkaloid IO low borderline
Pvir09NG0052000.5 Alkaloid IO low borderline
Pvir09NG0059600.1 Alkaloid IO low borderline
Pvir09NG0059600.2 Alkaloid IO low borderline
Pvir09NG0059620.1 Alkaloid IO low borderline
Pvir09NG0059620.2 Alkaloid IO low borderline
Pvir09NG0059620.4 Alkaloid IO low borderline
Pvir09NG0059620.5 Alkaloid IO low borderline
Pvir09NG0059620.6 Alkaloid IO low borderline
Pvir09NG0060040.1 Alkaloid IO medium borderline
Pvir09NG0060040.2 Alkaloid IO medium borderline
Pvir08KG0011340.1 Alkaloid ISY medium pass
Pvir08KG0020860.1 Alkaloid ISY medium pass
Pvir08NG0008940.1 Alkaloid ISY medium pass
Pvir08NG0008940.2 Alkaloid ISY medium pass
Pvir09KG0039440.1 Alkaloid ISY medium pass
Pvir09KG0039450.1 Alkaloid ISY medium pass
Pvir09KG0039460.1 Alkaloid ISY medium pass
Pvir09KG0039460.2 Alkaloid ISY medium pass
Pvir09KG0039460.3 Alkaloid ISY medium pass
Pvir09KG0039480.1 Alkaloid ISY medium pass
Pvir09KG0061050.1 Alkaloid ISY low borderline