PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pvir05NG0032050.1 Terpenoid HMGR low borderline
Pvir06KG0026970.1 Terpenoid HMGR medium pass
Pvir06KG0026970.2 Terpenoid HMGR medium pass
Pvir06NG0025630.1 Terpenoid HMGR medium pass
Pvir01KG0003080.1 Terpenoid HMGS medium pass
Pvir02KG0034490.1 Terpenoid HMGS high pass
Pvir02KG0034490.2 Terpenoid HMGS high pass
Pvir02KG0034490.3 Terpenoid HMGS high pass
Pvir02KG0034490.4 Terpenoid HMGS high pass
Pvir02NG0031760.1 Terpenoid HMGS high pass
Pvir02NG0031760.2 Terpenoid HMGS high pass
Pvir02NG0031760.3 Terpenoid HMGS high pass
Pvir02NG0031760.4 Terpenoid HMGS high pass
Pvir03NG0042160.1 Terpenoid HMGS low borderline
Pvir05KG0036520.1 Terpenoid HMGS high pass
Pvir05KG0036520.2 Terpenoid HMGS high pass
Pvir05KG0036520.3 Terpenoid HMGS high pass
Pvir05KG0036520.4 Terpenoid HMGS high pass
Pvir05KG0036520.5 Terpenoid HMGS high pass
Pvir05KG0036520.6 Terpenoid HMGS high pass
Pvir09KG0061920.1 Terpenoid HMGS high pass
Pvir09NG0061390.1 Terpenoid HMGS high pass
Pvir09NG0061390.2 Terpenoid HMGS high pass
Pvir09NG0061390.3 Terpenoid HMGS high pass
Pvir01NG0006430.1 Terpenoid IDI low borderline
Pvir01NG0018880.1 Terpenoid IDI low borderline
Pvir02KG0042110.1 Terpenoid IDI medium pass
Pvir02KG0042120.1 Terpenoid IDI medium pass
Pvir02NG0039000.1 Terpenoid IDI medium pass
Pvir02NG0039010.1 Terpenoid IDI medium pass
Pvir03KG0029700.1 Terpenoid IDI medium pass
Pvir03NG0028000.1 Terpenoid IDI medium pass
Pvir05KG0048220.1 Terpenoid MCT/IspD high pass
Pvir05KG0048220.2 Terpenoid MCT/IspD high pass
Pvir05NG0047490.1 Terpenoid MCT/IspD high pass
Pvir06KG0009730.1 Terpenoid MCT/IspD low borderline
Pvir06KG0009730.2 Terpenoid MCT/IspD low borderline
Pvir06KG0009730.3 Terpenoid MCT/IspD low borderline
Pvir07KG0030550.1 Terpenoid MCT/IspD low borderline
Pvir07NG0028710.1 Terpenoid MCT/IspD low borderline
Pvir07NG0028710.2 Terpenoid MCT/IspD low borderline
Pvir07NG0028710.4 Terpenoid MCT/IspD low borderline
Pvir07NG0028710.6 Terpenoid MCT/IspD low borderline
Pvir08KG0024090.1 Terpenoid MCT/IspD low borderline
Pvir08NG0020170.1 Terpenoid MCT/IspD low borderline
Pvir01KG0033190.1 Terpenoid MDS/IspF high pass
Pvir01NG0032420.1 Terpenoid MDS/IspF high pass
Pvir05KG0054270.1 Terpenoid MDS/IspF low borderline
Pvir05NG0053800.1 Terpenoid MDS/IspF low borderline
Pvir01KG0042660.1 Terpenoid MVD medium pass