PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pvir05NG0004950.1 Alkaloid PMT medium pass
Pvir05NG0015230.1 Alkaloid PMT medium pass
Pvir05NG0027050.1 Alkaloid PMT medium pass
Pvir05NG0027060.1 Alkaloid PMT medium pass
Pvir05NG0050450.1 Alkaloid PMT medium pass
Pvir05NG0050480.1 Alkaloid PMT medium pass
Pvir06KG0010580.1 Alkaloid PMT medium pass
Pvir06KG0010580.2 Alkaloid PMT medium pass
Pvir06KG0010580.3 Alkaloid PMT medium pass
Pvir06KG0010590.1 Alkaloid PMT medium pass
Pvir06KG0010590.2 Alkaloid PMT medium pass
Pvir06KG0010590.3 Alkaloid PMT medium pass
Pvir06KG0020530.1 Alkaloid PMT medium pass
Pvir06NG0010170.1 Alkaloid PMT medium pass
Pvir06NG0018690.1 Alkaloid PMT medium pass
Pvir06NG0018690.2 Alkaloid PMT medium pass
Pvir06NG0018690.3 Alkaloid PMT low borderline
Pvir06NG0018690.4 Alkaloid PMT medium pass
Pvir06NG0018700.1 Alkaloid PMT medium pass
Pvir06NG0026210.1 Alkaloid PMT low borderline
Pvir07KG0006210.1 Alkaloid PMT medium pass
Pvir07KG0006260.1 Alkaloid PMT medium pass
Pvir07KG0006260.2 Alkaloid PMT medium pass
Pvir07KG0006560.1 Alkaloid PMT medium pass
Pvir07KG0007980.1 Alkaloid PMT medium pass
Pvir07KG0008020.1 Alkaloid PMT medium pass
Pvir07KG0030120.1 Alkaloid PMT low borderline
Pvir07NG0003400.1 Alkaloid PMT medium pass
Pvir07NG0003740.1 Alkaloid PMT medium pass
Pvir07NG0006750.1 Alkaloid PMT medium pass
Pvir07NG0008930.1 Alkaloid PMT low borderline
Pvir07NG0028320.1 Alkaloid PMT low borderline
Pvir08KG0009900.1 Alkaloid PMT low borderline
Pvir08KG0009990.1 Alkaloid PMT medium pass
Pvir08KG0010030.1 Alkaloid PMT low borderline
Pvir08KG0014390.1 Alkaloid PMT medium pass
Pvir08KG0014400.1 Alkaloid PMT medium pass
Pvir08KG0014480.1 Alkaloid PMT medium pass
Pvir08KG0014560.1 Alkaloid PMT low borderline
Pvir08KG0014590.1 Alkaloid PMT medium pass
Pvir08KG0019720.1 Alkaloid PMT medium pass
Pvir08KG0019720.2 Alkaloid PMT medium pass
Pvir08KG0019740.1 Alkaloid PMT medium pass
Pvir08NG0006170.1 Alkaloid PMT medium pass
Pvir08NG0011390.1 Alkaloid PMT medium pass
Pvir08NG0011820.1 Alkaloid PMT medium pass
Pvir08NG0011960.1 Alkaloid PMT medium pass
Pvir08NG0014860.1 Alkaloid PMT medium pass
Pvir08NG0023170.1 Alkaloid PMT low borderline
Pvir08NG0023170.2 Alkaloid PMT low borderline