PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pvir09KG0021080.1 Alkaloid PMT medium pass
Pvir09KG0039840.1 Alkaloid PMT medium pass
Pvir01KG0009770.1 Alkaloid PYKS low borderline
Pvir01KG0009770.2 Alkaloid PYKS low borderline
Pvir01KG0009770.3 Alkaloid PYKS low borderline
Pvir01KG0037670.1 Alkaloid PYKS low borderline
Pvir01KG0043850.1 Alkaloid PYKS low borderline
Pvir01NG0008940.1 Alkaloid PYKS low borderline
Pvir01NG0008940.2 Alkaloid PYKS low borderline
Pvir01NG0025440.1 Alkaloid PYKS high pass
Pvir01NG0036410.1 Alkaloid PYKS low borderline
Pvir01NG0036410.2 Alkaloid PYKS low borderline
Pvir01NG0042310.1 Alkaloid PYKS low borderline
Pvir02KG0002340.1 Alkaloid PYKS high pass
Pvir02KG0002370.1 Alkaloid PYKS high pass
Pvir02KG0002370.2 Alkaloid PYKS high pass
Pvir02KG0002430.1 Alkaloid PYKS high pass
Pvir02KG0002450.1 Alkaloid PYKS high pass
Pvir02KG0002480.1 Alkaloid PYKS high pass
Pvir02KG0002500.1 Alkaloid PYKS high pass
Pvir02KG0002500.2 Alkaloid PYKS high pass
Pvir02KG0002520.1 Alkaloid PYKS high pass
Pvir02KG0002550.1 Alkaloid PYKS high pass
Pvir02KG0008100.1 Alkaloid PYKS high pass
Pvir02KG0008100.2 Alkaloid PYKS high pass
Pvir02KG0008130.1 Alkaloid PYKS high pass
Pvir02KG0008150.1 Alkaloid PYKS medium pass
Pvir02KG0008180.1 Alkaloid PYKS medium pass
Pvir02KG0008200.1 Alkaloid PYKS high pass
Pvir02KG0014410.1 Alkaloid PYKS low borderline
Pvir02KG0023590.1 Alkaloid PYKS low borderline
Pvir02KG0039550.1 Alkaloid PYKS high pass
Pvir02KG0039560.1 Alkaloid PYKS high pass
Pvir02KG0039570.1 Alkaloid PYKS high pass
Pvir02KG0039580.1 Alkaloid PYKS high pass
Pvir02KG0039590.1 Alkaloid PYKS high pass
Pvir02KG0039640.1 Alkaloid PYKS high pass
Pvir02KG0039690.1 Alkaloid PYKS high pass
Pvir02KG0047650.1 Alkaloid PYKS high pass
Pvir02NG0001750.1 Alkaloid PYKS high pass
Pvir02NG0001770.1 Alkaloid PYKS medium pass
Pvir02NG0001820.1 Alkaloid PYKS high pass
Pvir02NG0001820.2 Alkaloid PYKS high pass
Pvir02NG0012380.1 Alkaloid PYKS medium pass
Pvir02NG0012380.2 Alkaloid PYKS medium pass
Pvir02NG0012380.3 Alkaloid PYKS medium pass
Pvir02NG0012380.4 Alkaloid PYKS medium pass
Pvir02NG0012380.5 Alkaloid PYKS medium pass
Pvir02NG0012380.6 Alkaloid PYKS medium pass
Pvir02NG0021020.1 Alkaloid PYKS low borderline