PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pvir05NG0021770.1 Flavonoid ANS/LDOX medium borderline
Pvir06KG0019590.1 Flavonoid ANS/LDOX low borderline
Pvir06KG0019620.1 Flavonoid ANS/LDOX low borderline
Pvir06NG0006040.1 Flavonoid ANS/LDOX low borderline
Pvir06NG0006070.1 Flavonoid ANS/LDOX low borderline
Pvir06NG0006070.2 Flavonoid ANS/LDOX low borderline
Pvir06NG0008960.5 Flavonoid ANS/LDOX medium borderline
Pvir06NG0017690.1 Flavonoid ANS/LDOX low borderline
Pvir06NG0017720.1 Flavonoid ANS/LDOX low borderline
Pvir07KG0033160.1 Flavonoid ANS/LDOX medium borderline
Pvir08NG0005600.1 Flavonoid ANS/LDOX low borderline
Pvir08NG0006390.1 Flavonoid ANS/LDOX medium pass
Pvir08NG0006430.1 Flavonoid ANS/LDOX low borderline
Pvir09KG0038850.1 Flavonoid ANS/LDOX low borderline
Pvir09KG0043340.1 Flavonoid ANS/LDOX medium pass
Pvir09KG0062910.5 Flavonoid ANS/LDOX medium pass
Pvir09NG0035090.1 Flavonoid ANS/LDOX medium borderline
Pvir09NG0042730.1 Flavonoid ANS/LDOX medium borderline
Pvir01KG0019290.1 Flavonoid C4H medium borderline
Pvir01NG0006890.2 Flavonoid C4H low borderline
Pvir01NG0014810.1 Flavonoid C4H low borderline
Pvir01NG0018420.1 Flavonoid C4H medium borderline
Pvir01NG0042760.1 Flavonoid C4H medium borderline
Pvir01NG0042760.2 Flavonoid C4H medium borderline
Pvir02KG0049770.1 Flavonoid C4H medium borderline
Pvir02NG0046230.1 Flavonoid C4H medium borderline
Pvir03NG0035020.1 Flavonoid C4H low borderline
Pvir03NG0038580.1 Flavonoid C4H low borderline
Pvir03NG0038610.1 Flavonoid C4H low borderline
Pvir05KG0034310.1 Flavonoid C4H medium borderline
Pvir05KG0034330.1 Flavonoid C4H medium borderline
Pvir05KG0043320.1 Flavonoid C4H medium borderline
Pvir05NG0033240.1 Flavonoid C4H medium borderline
Pvir05NG0033250.1 Flavonoid C4H medium borderline
Pvir07KG0013550.1 Flavonoid C4H medium borderline
Pvir07NG0008110.1 Flavonoid C4H low borderline
Pvir09NG0016570.1 Flavonoid C4H low borderline
Pvir09NG0016570.10 Flavonoid C4H low borderline
Pvir09NG0016570.11 Flavonoid C4H low borderline
Pvir09NG0016570.12 Flavonoid C4H low borderline
Pvir09NG0016570.13 Flavonoid C4H low borderline
Pvir09NG0016570.2 Flavonoid C4H low borderline
Pvir09NG0016570.3 Flavonoid C4H low borderline
Pvir09NG0016570.4 Flavonoid C4H low borderline
Pvir09NG0016570.5 Flavonoid C4H low borderline
Pvir09NG0016570.6 Flavonoid C4H low borderline
Pvir09NG0016570.7 Flavonoid C4H low borderline
Pvir09NG0016570.8 Flavonoid C4H low borderline
Pvir09NG0016570.9 Flavonoid C4H low borderline
Pvir09NG0037920.1 Flavonoid C4H low borderline