PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pvir09NG0049170.1 Flavonoid C4H low borderline
Pvirscaffold_1990002330.1 Flavonoid C4H low borderline
Pvir03KG0000770.1 Flavonoid CHI medium pass
Pvir03KG0000770.2 Flavonoid CHI medium pass
Pvir03KG0015090.1 Flavonoid CHI medium pass
Pvir03NG0013780.1 Flavonoid CHI medium pass
Pvir04KG0028720.1 Flavonoid CHI medium pass
Pvir08KG0000940.1 Flavonoid CHI medium pass
Pvir09KG0003340.1 Flavonoid CHI medium pass
Pvir09KG0003340.2 Flavonoid CHI medium pass
Pvir09NG0003400.1 Flavonoid CHI medium pass
Pvir09NG0003400.2 Flavonoid CHI medium pass
Pvir09NG0003400.3 Flavonoid CHI medium pass
Pvir01KG0009770.1 Flavonoid CHS low borderline
Pvir01KG0009770.2 Flavonoid CHS low borderline
Pvir01KG0009770.3 Flavonoid CHS low borderline
Pvir01NG0008940.1 Flavonoid CHS low borderline
Pvir01NG0008940.2 Flavonoid CHS low borderline
Pvir01NG0025440.1 Flavonoid CHS medium pass
Pvir02KG0002340.1 Flavonoid CHS medium pass
Pvir02KG0002370.1 Flavonoid CHS medium pass
Pvir02KG0002370.2 Flavonoid CHS medium pass
Pvir02KG0002430.1 Flavonoid CHS medium pass
Pvir02KG0002450.1 Flavonoid CHS medium pass
Pvir02KG0002480.1 Flavonoid CHS medium pass
Pvir02KG0002500.1 Flavonoid CHS medium pass
Pvir02KG0002500.2 Flavonoid CHS medium pass
Pvir02KG0002520.1 Flavonoid CHS medium pass
Pvir02KG0002550.1 Flavonoid CHS medium pass
Pvir02KG0008100.1 Flavonoid CHS medium pass
Pvir02KG0008100.2 Flavonoid CHS medium pass
Pvir02KG0008130.1 Flavonoid CHS medium pass
Pvir02KG0008150.1 Flavonoid CHS medium pass
Pvir02KG0008180.1 Flavonoid CHS medium pass
Pvir02KG0008200.1 Flavonoid CHS medium pass
Pvir02KG0014410.1 Flavonoid CHS medium pass
Pvir02KG0039550.1 Flavonoid CHS medium pass
Pvir02KG0039560.1 Flavonoid CHS medium pass
Pvir02KG0039570.1 Flavonoid CHS medium pass
Pvir02KG0039580.1 Flavonoid CHS medium pass
Pvir02KG0039590.1 Flavonoid CHS medium pass
Pvir02KG0039640.1 Flavonoid CHS medium pass
Pvir02KG0039690.1 Flavonoid CHS medium pass
Pvir02KG0047650.1 Flavonoid CHS medium pass
Pvir02NG0001750.1 Flavonoid CHS medium pass
Pvir02NG0001770.1 Flavonoid CHS medium pass
Pvir02NG0001820.1 Flavonoid CHS medium pass
Pvir02NG0001820.2 Flavonoid CHS medium pass
Pvir02NG0012380.1 Flavonoid CHS medium pass
Pvir02NG0012380.2 Flavonoid CHS medium pass