PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pvir02NG0012380.3 Flavonoid CHS medium pass
Pvir02NG0012380.4 Flavonoid CHS medium pass
Pvir02NG0012380.5 Flavonoid CHS medium pass
Pvir02NG0012380.6 Flavonoid CHS medium pass
Pvir02NG0036800.1 Flavonoid CHS medium pass
Pvir02NG0036810.1 Flavonoid CHS medium pass
Pvir02NG0036820.1 Flavonoid CHS medium pass
Pvir02NG0036830.1 Flavonoid CHS medium pass
Pvir04NG0008740.1 Flavonoid CHS low borderline
Pvir07KG0024100.1 Flavonoid CHS medium pass
Pvir07KG0024100.2 Flavonoid CHS medium pass
Pvir07KG0024100.3 Flavonoid CHS medium pass
Pvir07KG0024100.4 Flavonoid CHS medium pass
Pvir07KG0024100.5 Flavonoid CHS medium pass
Pvir07NG0006350.1 Flavonoid CHS medium pass
Pvir07NG0022340.1 Flavonoid CHS medium pass
Pvir08KG0020130.1 Flavonoid CHS medium pass
Pvir08KG0020150.1 Flavonoid CHS medium pass
Pvir08KG0020460.1 Flavonoid CHS medium pass
Pvir08KG0020510.1 Flavonoid CHS medium pass
Pvir08KG0020520.1 Flavonoid CHS medium pass
Pvir08KG0020530.1 Flavonoid CHS medium pass
Pvir08KG0020550.1 Flavonoid CHS medium pass
Pvir08NG0016980.1 Flavonoid CHS medium pass
Pvir08NG0016990.1 Flavonoid CHS medium pass
Pvir08NG0017010.1 Flavonoid CHS medium pass
Pvir08NG0017020.1 Flavonoid CHS medium pass
Pvir08NG0017030.1 Flavonoid CHS medium pass
Pvir08NG0017040.1 Flavonoid CHS medium pass
Pvir08NG0020040.1 Flavonoid CHS medium pass
Pvir08NG0021810.1 Flavonoid CHS medium pass
Pvir09KG0022740.1 Flavonoid CHS medium pass
Pvir09NG0022580.1 Flavonoid CHS medium pass
Pvir09NG0022580.2 Flavonoid CHS medium pass
Pvir01KG0002000.1 Flavonoid DFR low borderline
Pvir01KG0043750.1 Flavonoid DFR medium pass
Pvir01KG0043760.1 Flavonoid DFR medium pass
Pvir01NG0042240.1 Flavonoid DFR medium pass
Pvir01NG0042250.1 Flavonoid DFR medium borderline
Pvir02KG0019730.1 Flavonoid DFR medium borderline
Pvir02KG0019730.2 Flavonoid DFR low borderline
Pvir02KG0032060.1 Flavonoid DFR medium borderline
Pvir02KG0032160.1 Flavonoid DFR medium borderline
Pvir02NG0029250.1 Flavonoid DFR medium borderline
Pvir02NG0029270.1 Flavonoid DFR medium borderline
Pvir02NG0029310.1 Flavonoid DFR medium borderline
Pvir02NG0029430.1 Flavonoid DFR medium borderline
Pvir02NG0043060.2 Flavonoid DFR medium borderline
Pvir02NG0043060.3 Flavonoid DFR medium borderline
Pvir04KG0003790.1 Flavonoid DFR medium pass