Plagiochila semidecurrens (plagiochila_semidecurrens)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Phenylpropanoid pathway 27.53% Terpenoid pathway 24.74% Alkaloid pathway 19.33% Flavonoid pathway 12.45% Rosmarinic acid pathway 10.54% Steroid pathway 5.42%

Family Distribution

683 Candidate Genes

C4H 6.37% BAHD 5.86% C3'H/CYP98A 5.19% POD 5.03% CYP76 4.97% 4CL 4.86% NMT 3.41% IFS 3.02%

Other Families 61.31%

More Families (93)

UGT 53 2.96% STR 52 2.9% 7DLGT 48 2.68% UFGT 47 2.62% DWF4/CYP90B1 40 2.23% BR6OX2/CYP85A2 39 2.18% IFR 37 2.07% T3O 36 2.01% F3H 34 1.9% F3'H/CYP75B 31 1.73% TRI/TRII 30 1.68% GS 30 1.68% PAL 27 1.51% H6H 25 1.4% G8O/G8H 23 1.28% HCT 22 1.23% COMT 22 1.23% CAD 21 1.17% SMT1/SMT2/SMT3 21 1.17% LAMT 19 1.06% IO 19 1.06% RAS 17 0.95% ANR 15 0.84% CSE 15 0.84% 8HGO 14 0.78% CNMT 14 0.78% T16H 14 0.78% LAC 14 0.78% SGD 13 0.73% FNS 13 0.73% COR 11 0.61% F3'5'H/CYP75A 11 0.61% PYKS 10 0.56% CYP80B1 10 0.56% CCR 10 0.56% CPD/CYP90A1 10 0.56% PMT 9 0.5% CAS 9 0.5% BR6OX1/CYP85A1 9 0.5% AACT 9 0.5% CYP719 8 0.45% 16OMT 8 0.45% NCS 7 0.39% CODM/T6ODM 7 0.39% CCoAOMT 7 0.39% F5H/CYP84A 7 0.39% TPS 7 0.39% SLS 6 0.34% TAT 6 0.34% CYP71 6 0.34% MVK 6 0.34% BBE 5 0.28% CHS 5 0.28% CPR 5 0.28% DWF5 5 0.28% ISY 4 0.22% CYP80F1 4 0.22% MPO 4 0.22% DFR 4 0.22% HPPR 4 0.22% CYP90D1 4 0.22% PMK 4 0.22% DXS 4 0.22% CMK/IspE 4 0.22% MCT/IspD 4 0.22% TDC 3 0.17% XMT_MXMT_DXMT 3 0.17% ADC 3 0.17% 7DLH 3 0.17% CHI 3 0.17% ANS/LDOX 3 0.17% DWF7 3 0.17% SMO1/SMO2 3 0.17% DET2 3 0.17% SQS/FDFT1 3 0.17% HMGR 3 0.17% HDS/IspG 3 0.17% GGPPS 3 0.17% SQE 2 0.11% ROT3/CYP90C1 2 0.11% FK 2 0.11% DWF1 2 0.11% MVD 2 0.11% MDS/IspF 2 0.11% GES 1 0.06% 6OMT_4OMT_SOMT 1 0.06% CPI1 1 0.06% HYD1 1 0.06% CYP51G1 1 0.06% FPPS 1 0.06% IDI 1 0.06% DXR 1 0.06% HMGS 1 0.06%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Phenylpropanoid pathway	188	12	POD (84)	View species results
Terpenoid pathway	169	17	BAHD (62)	View species results
Alkaloid pathway	132	18	NMT (21)	View species results
Flavonoid pathway	85	10	UFGT (42)	View species results
Rosmarinic acid pathway	72	7	C4H (35)	View species results
Steroid pathway	37	13	CAS (9)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	633	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	144	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: BAHD

Gene	Pathway	Family	Confidence	Status	Best Target
Psem10390001530	Terpenoid	BAHD	low	borderline	BAHD__00010__sp_A0AAW1LG41_BAHD1_SAPOF
Psem11660007150	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
Psem2360012320	Terpenoid	BAHD	low	borderline	BAHD__00067__sp_Q9ASU1_DGAT2_ARATH
Psem3231340035800	Terpenoid	BAHD	medium	pass	BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Psem3305010041760	Terpenoid	BAHD	medium	pass	BAHD__00026__sp_O64811_SCP9_ARATH
Psem3459960052000	Terpenoid	BAHD	medium	pass	BAHD__00010__sp_A0AAW1LG41_BAHD1_SAPOF
Psem3505010053830	Terpenoid	BAHD	medium	pass	BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH
Psem3525550054980	Terpenoid	BAHD	low	borderline	BAHD__00010__sp_A0AAW1LG41_BAHD1_SAPOF
Psem3651150060650	Terpenoid	BAHD	medium	pass	BAHD__00034__sp_P10349_GPAT2_CUCMO
Psem3878220075740	Terpenoid	BAHD	low	borderline	BAHD__00010__sp_A0AAW1LG41_BAHD1_SAPOF
Psem3941730083130	Terpenoid	BAHD	medium	pass	BAHD__00073__sp_Q9FF86_DCR_ARATH
Psem3944860084640	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
Psem4115430117550	Terpenoid	BAHD	medium	pass	BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Psem4162770120430	Terpenoid	BAHD	low	borderline	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Psem4186620122620	Terpenoid	BAHD	medium	pass	BAHD__00023__sp_O22975_LPAAT_ARATH
Psem4224290127630	Terpenoid	BAHD	medium	pass	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Psem4228150128400	Terpenoid	BAHD	low	borderline	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Psem4232580129130	Terpenoid	BAHD	medium	pass	BAHD__00073__sp_Q9FF86_DCR_ARATH
Psem4241620130400	Terpenoid	BAHD	medium	pass	BAHD__00055__sp_Q8H780_SCP13_ARATH
Psem4245970131490	Terpenoid	BAHD	low	borderline	BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
Psem4248100131960	Terpenoid	BAHD	medium	pass	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Psem4278170137520	Terpenoid	BAHD	medium	pass	BAHD__00073__sp_Q9FF86_DCR_ARATH
Psem4296280142030	Terpenoid	BAHD	medium	pass	BAHD__00014__sp_B9RK42_GPC1_RICCO
Psem4303230144020	Terpenoid	BAHD	medium	pass	BAHD__00073__sp_Q9FF86_DCR_ARATH
Psem4314800147080	Terpenoid	BAHD	medium	pass	BAHD__00073__sp_Q9FF86_DCR_ARATH
Psem4321710149560	Terpenoid	BAHD	low	borderline	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Psem4342390157410	Terpenoid	BAHD	medium	pass	BAHD__00003__sp_A0A078H868_GPC1_BRANA
Psem4346020159240	Terpenoid	BAHD	medium	pass	BAHD__00082__sp_Q9LLY4_LPAT1_BRANA
Psem4352890163030	Terpenoid	BAHD	medium	pass	BAHD__00022__sp_K7PEY4_RAM2_MEDTR
Psem4363570168350	Terpenoid	BAHD	low	borderline	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Psem4364010168670	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH
Psem4369610171460	Terpenoid	BAHD	medium	pass	BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH
Psem4375780175560	Terpenoid	BAHD	medium	pass	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Psem4386530182470	Terpenoid	BAHD	low	borderline	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Psem4393540187550	Terpenoid	BAHD	low	borderline	BAHD__00038__sp_Q3EC11_ZDHC2_ARATH
Psem4397440191340	Terpenoid	BAHD	medium	pass	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
Psem4398270192060	Terpenoid	BAHD	medium	pass	BAHD__00052__sp_Q8GWG0_GPAT9_ARATH
Psem4401700194310	Terpenoid	BAHD	medium	pass	BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH
Psem4402940195480	Terpenoid	BAHD	low	borderline	BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
Psem4404520196900	Terpenoid	BAHD	medium	pass	BAHD__00017__sp_F4IDU4_MBOA1_ARATH
Psem4406500198880	Terpenoid	BAHD	medium	pass	BAHD__00063__sp_Q93VV0_ZDHC6_ARATH
Psem4408560200560	Terpenoid	BAHD	medium	pass	BAHD__00005__sp_A0A161IUT7_DGAT1_CORAE
Psem4413050205190	Terpenoid	BAHD	low	borderline	BAHD__00010__sp_A0AAW1LG41_BAHD1_SAPOF
Psem4413130205300	Terpenoid	BAHD	low	borderline	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
Psem4413290205440	Terpenoid	BAHD	low	borderline	BAHD__00073__sp_Q9FF86_DCR_ARATH
Psem4416150208680	Terpenoid	BAHD	medium	pass	BAHD__00097__sp_Q9ZV87_NAPES_ARATH
Psem4422070214560	Terpenoid	BAHD	low	borderline	BAHD__00002__sp_A0A068BIF1_AT9_ACTER
Psem4424050216720	Terpenoid	BAHD	medium	pass	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Psem4424050216730	Terpenoid	BAHD	low	borderline	BAHD__00002__sp_A0A068BIF1_AT9_ACTER
Psem4429090222230	Terpenoid	BAHD	medium	pass	BAHD__00022__sp_K7PEY4_RAM2_MEDTR