Plagiochila semidecurrens (plagiochila_semidecurrens)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Phenylpropanoid pathway 27.53% Terpenoid pathway 24.74% Alkaloid pathway 19.33% Flavonoid pathway 12.45% Rosmarinic acid pathway 10.54% Steroid pathway 5.42%

Family Distribution

683 Candidate Genes

C4H 6.37% BAHD 5.86% C3'H/CYP98A 5.19% POD 5.03% CYP76 4.97% 4CL 4.86% NMT 3.41% IFS 3.02%

Other Families 61.31%

More Families (93)

UGT 53 2.96% STR 52 2.9% 7DLGT 48 2.68% UFGT 47 2.62% DWF4/CYP90B1 40 2.23% BR6OX2/CYP85A2 39 2.18% IFR 37 2.07% T3O 36 2.01% F3H 34 1.9% F3'H/CYP75B 31 1.73% TRI/TRII 30 1.68% GS 30 1.68% PAL 27 1.51% H6H 25 1.4% G8O/G8H 23 1.28% HCT 22 1.23% COMT 22 1.23% CAD 21 1.17% SMT1/SMT2/SMT3 21 1.17% LAMT 19 1.06% IO 19 1.06% RAS 17 0.95% ANR 15 0.84% CSE 15 0.84% 8HGO 14 0.78% CNMT 14 0.78% T16H 14 0.78% LAC 14 0.78% SGD 13 0.73% FNS 13 0.73% COR 11 0.61% F3'5'H/CYP75A 11 0.61% PYKS 10 0.56% CYP80B1 10 0.56% CCR 10 0.56% CPD/CYP90A1 10 0.56% PMT 9 0.5% CAS 9 0.5% BR6OX1/CYP85A1 9 0.5% AACT 9 0.5% CYP719 8 0.45% 16OMT 8 0.45% NCS 7 0.39% CODM/T6ODM 7 0.39% CCoAOMT 7 0.39% F5H/CYP84A 7 0.39% TPS 7 0.39% SLS 6 0.34% TAT 6 0.34% CYP71 6 0.34% MVK 6 0.34% BBE 5 0.28% CHS 5 0.28% CPR 5 0.28% DWF5 5 0.28% ISY 4 0.22% CYP80F1 4 0.22% MPO 4 0.22% DFR 4 0.22% HPPR 4 0.22% CYP90D1 4 0.22% PMK 4 0.22% DXS 4 0.22% CMK/IspE 4 0.22% MCT/IspD 4 0.22% TDC 3 0.17% XMT_MXMT_DXMT 3 0.17% ADC 3 0.17% 7DLH 3 0.17% CHI 3 0.17% ANS/LDOX 3 0.17% DWF7 3 0.17% SMO1/SMO2 3 0.17% DET2 3 0.17% SQS/FDFT1 3 0.17% HMGR 3 0.17% HDS/IspG 3 0.17% GGPPS 3 0.17% SQE 2 0.11% ROT3/CYP90C1 2 0.11% FK 2 0.11% DWF1 2 0.11% MVD 2 0.11% MDS/IspF 2 0.11% GES 1 0.06% 6OMT_4OMT_SOMT 1 0.06% CPI1 1 0.06% HYD1 1 0.06% CYP51G1 1 0.06% FPPS 1 0.06% IDI 1 0.06% DXR 1 0.06% HMGS 1 0.06%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Phenylpropanoid pathway	188	12	POD (84)	View species results
Terpenoid pathway	169	17	BAHD (62)	View species results
Alkaloid pathway	132	18	NMT (21)	View species results
Flavonoid pathway	85	10	UFGT (42)	View species results
Rosmarinic acid pathway	72	7	C4H (35)	View species results
Steroid pathway	37	13	CAS (9)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	633	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	144	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: BAHD

Gene	Pathway	Family	Confidence	Status	Best Target
Psem4433480226960	Terpenoid	BAHD	medium	pass	BAHD__00055__sp_Q8H780_SCP13_ARATH
Psem4433840227610	Terpenoid	BAHD	medium	pass	BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
Psem4434010227780	Terpenoid	BAHD	medium	pass	BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN
Psem4434280228160	Terpenoid	BAHD	medium	pass	BAHD__00041__sp_Q4VCM1_LCAT2_ARATH
Psem4440210235290	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
Psem4440830236270	Terpenoid	BAHD	medium	pass	BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
Psem4443720239950	Terpenoid	BAHD	medium	pass	BAHD__00068__sp_Q9C533_ZDHC1_ARATH
Psem4445500242530	Terpenoid	BAHD	low	borderline	BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Psem4447420245180	Terpenoid	BAHD	medium	pass	BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
Psem4447420245190	Terpenoid	BAHD	low	borderline	BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
Psem4447420245200	Terpenoid	BAHD	low	borderline	BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
Psem4447420245210	Terpenoid	BAHD	medium	pass	BAHD__00093__sp_Q9SV07_ASAT1_ARATH
Psem4448410246820	Terpenoid	BAHD	low	borderline	BAHD__00092__sp_Q9SU91_LPXA_ARATH
Psem4451640251570	Terpenoid	BAHD	low	borderline	BAHD__00002__sp_A0A068BIF1_AT9_ACTER
Psem4452520252900	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
Psem4454420255470	Terpenoid	BAHD	medium	pass	BAHD__00082__sp_Q9LLY4_LPAT1_BRANA
Psem4455220256530	Terpenoid	BAHD	low	borderline	BAHD__00006__sp_A0A2R6Q326_AT16_ACTCC
Psem4455690257130	Terpenoid	BAHD	low	borderline	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Psem4455780257230	Terpenoid	BAHD	medium	pass	BAHD__00062__sp_Q93V61_LCAT3_ARATH
Psem4456040257550	Terpenoid	BAHD	medium	pass	BAHD__00022__sp_K7PEY4_RAM2_MEDTR
Psem4456180257740	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
Psem4461580265360	Terpenoid	BAHD	low	borderline	BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Psem4461790265650	Terpenoid	BAHD	medium	pass	BAHD__00040__sp_Q41745_LPAT_MAIZE
Psem4466980272530	Terpenoid	BAHD	medium	pass	BAHD__00057__sp_Q8L7R3_LPCT1_ARATH
Psem4467790273550	Terpenoid	BAHD	medium	pass	BAHD__00036__sp_Q10L01_ZDHC9_ORYSJ
Psem4598620280530	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH
Psem4598640280570	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH
Psem4632300281880	Terpenoid	BAHD	medium	pass	BAHD__00043__sp_Q52T38_ZDH22_ARATH
Psem4632320281900	Terpenoid	BAHD	medium	pass	BAHD__00043__sp_Q52T38_ZDH22_ARATH
Psem4635290281910	Terpenoid	BAHD	low	borderline	BAHD__00010__sp_A0AAW1LG41_BAHD1_SAPOF
Psem4635300281930	Terpenoid	BAHD	low	borderline	BAHD__00010__sp_A0AAW1LG41_BAHD1_SAPOF
Psem4647090282150	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
Psem4647100282180	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
Psem4675550283820	Terpenoid	BAHD	medium	pass	BAHD__00073__sp_Q9FF86_DCR_ARATH
Psem4675550283830	Terpenoid	BAHD	medium	pass	BAHD__00006__sp_A0A2R6Q326_AT16_ACTCC
Psem4675560283860	Terpenoid	BAHD	medium	pass	BAHD__00073__sp_Q9FF86_DCR_ARATH
Psem4675560283870	Terpenoid	BAHD	medium	pass	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
Psem4721450295760	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
Psem4721470295820	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
Psem4960297030	Terpenoid	BAHD	medium	pass	BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Psem5190297680	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
Psem5190297690	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
Psem5190297700	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
Psem6250302040	Terpenoid	BAHD	low	borderline	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Psem6270302080	Terpenoid	BAHD	low	borderline	BAHD__00002__sp_A0A068BIF1_AT9_ACTER
Psem6270302100	Terpenoid	BAHD	medium	pass	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Psem7130304510	Terpenoid	BAHD	medium	pass	BAHD__00021__sp_K7K424_DAT2D_SOYBN
Psem7350305460	Terpenoid	BAHD	low	borderline	BAHD__00002__sp_A0A068BIF1_AT9_ACTER
Psem7490306090	Terpenoid	BAHD	medium	pass	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Psem8240309610	Terpenoid	BAHD	low	borderline	BAHD__00016__sp_D4NUX0_HCT1_ACTRA