PlantSME Plant secondary metabolism enzyme database

Plagiochila semidecurrens (plagiochila_semidecurrens)

Imported from atlas release summary for Plagiochila semidecurrens.

683
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 188 12 POD (84) View species results
Terpenoid pathway 169 17 BAHD (62) View species results
Alkaloid pathway 132 18 NMT (21) View species results
Flavonoid pathway 85 10 UFGT (42) View species results
Rosmarinic acid pathway 72 7 C4H (35) View species results
Steroid pathway 37 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 633 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 144 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C3'H/CYP98A
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Gene Pathway Family Confidence Status
Psem4415320207970 Phenylpropanoid C3'H/CYP98A low borderline
Psem4418780210970 Phenylpropanoid C3'H/CYP98A low borderline
Psem4419220211480 Phenylpropanoid C3'H/CYP98A low borderline
Psem4421230213600 Phenylpropanoid C3'H/CYP98A low borderline
Psem4423120215430 Phenylpropanoid C3'H/CYP98A low borderline
Psem4424150216850 Phenylpropanoid C3'H/CYP98A low borderline
Psem4424160216870 Phenylpropanoid C3'H/CYP98A low borderline
Psem4425380217840 Phenylpropanoid C3'H/CYP98A low borderline
Psem4425590218000 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4427800220610 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4430780223700 Phenylpropanoid C3'H/CYP98A high pass
Psem4432900226210 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4435550229610 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4437390231710 Phenylpropanoid C3'H/CYP98A low borderline
Psem4437850232180 Phenylpropanoid C3'H/CYP98A low borderline
Psem4438050232480 Phenylpropanoid C3'H/CYP98A low borderline
Psem4439140233750 Phenylpropanoid C3'H/CYP98A low borderline
Psem4439860234650 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4440390235510 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4441310236760 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4442170237990 Phenylpropanoid C3'H/CYP98A medium pass
Psem4447290245040 Phenylpropanoid C3'H/CYP98A low borderline
Psem4449720248860 Phenylpropanoid C3'H/CYP98A medium pass
Psem4449720248870 Phenylpropanoid C3'H/CYP98A medium pass
Psem4454950256210 Phenylpropanoid C3'H/CYP98A low borderline
Psem4456620258430 Phenylpropanoid C3'H/CYP98A low borderline
Psem4458410260660 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4459490262330 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4460300263620 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4466130271700 Phenylpropanoid C3'H/CYP98A low borderline
Psem4552210278510 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4552220278540 Phenylpropanoid C3'H/CYP98A medium borderline
Psem4552780278550 Phenylpropanoid C3'H/CYP98A low borderline
Psem4552810278570 Phenylpropanoid C3'H/CYP98A low borderline
Psem4598150280490 Phenylpropanoid C3'H/CYP98A low borderline
Psem4598160280500 Phenylpropanoid C3'H/CYP98A low borderline
Psem4656680282310 Phenylpropanoid C3'H/CYP98A medium pass
Psem4723260296290 Phenylpropanoid C3'H/CYP98A high pass
Psem4723270296310 Phenylpropanoid C3'H/CYP98A high pass
Psem4730296350 Phenylpropanoid C3'H/CYP98A medium borderline
Psem7520306210 Phenylpropanoid C3'H/CYP98A medium borderline
Psem7580306490 Phenylpropanoid C3'H/CYP98A low borderline
Psem8770311270 Phenylpropanoid C3'H/CYP98A medium borderline