PlantSME Plant secondary metabolism enzyme database

Plagiochila semidecurrens (plagiochila_semidecurrens)

Imported from atlas release summary for Plagiochila semidecurrens.

683
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 188 12 POD (84) View species results
Terpenoid pathway 169 17 BAHD (62) View species results
Alkaloid pathway 132 18 NMT (21) View species results
Flavonoid pathway 85 10 UFGT (42) View species results
Rosmarinic acid pathway 72 7 C4H (35) View species results
Steroid pathway 37 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 633 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 144 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
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Gene Pathway Family Confidence Status Best Target
Psem10490001890 Phenylpropanoid POD medium pass POD__00018__sp_Q8H0V5_OCP3_ARATH
Psem11650007030 Phenylpropanoid POD low borderline POD__00023__sp_Q9M7T0_PRX2F_ARATH
Psem11650007070 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Psem1730009860 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
Psem3746360062010 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
Psem4082710108140 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
Psem4097380110870 Phenylpropanoid POD medium pass POD__00002__sp_A5H8G4_PER1_MAIZE
Psem4097380110880 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
Psem4112560116790 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Psem4182040122200 Phenylpropanoid POD medium pass POD__00015__sp_Q69SV0_APX8_ORYSJ
Psem4190740123230 Phenylpropanoid POD medium pass POD__00025__sp_Q9SRZ4_PRX2C_ARATH
Psem4193560123820 Phenylpropanoid POD medium pass POD__00003__sp_A9PCL4_PRX2_POPTR
Psem4197120124560 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
Psem4209500125960 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Psem4228700128540 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
Psem4244650131230 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
Psem4259430133540 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
Psem4304560144250 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
Psem4317080147770 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Psem4320710149260 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Psem4338390155740 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Psem4338940156010 Phenylpropanoid POD medium pass POD__00023__sp_Q9M7T0_PRX2F_ARATH
Psem4345810159070 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
Psem4345810159080 Phenylpropanoid POD medium pass POD__00002__sp_A5H8G4_PER1_MAIZE
Psem4350730161790 Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
Psem4355880164700 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
Psem4368340170660 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Psem4375410175380 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
Psem4375410175390 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
Psem4384170180590 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Psem4385460181580 Phenylpropanoid POD medium pass POD__00003__sp_A9PCL4_PRX2_POPTR
Psem4385630181760 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
Psem4386710182690 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Psem4391850185960 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
Psem4393530187520 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Psem4394320188310 Phenylpropanoid POD medium pass POD__00002__sp_A5H8G4_PER1_MAIZE
Psem4400630193590 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Psem4407720199800 Phenylpropanoid POD medium pass POD__00016__sp_Q6QPJ6_PRXQ_POPJC
Psem4409900202140 Phenylpropanoid POD low borderline POD__00028__sp_Q9ZVD5_AGO4_ARATH
Psem4410430202600 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Psem4412490204540 Phenylpropanoid POD medium pass POD__00006__sp_O22850_GPX3_ARATH
Psem4415520208190 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
Psem4423850216430 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
Psem4424020216700 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
Psem4425240217720 Phenylpropanoid POD low borderline POD__00019__sp_Q949Y3_PPA26_ARATH
Psem4425730218080 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Psem4426830219320 Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
Psem4429030222050 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
Psem4429970222860 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
Psem4433780227460 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE