PlantSME Plant secondary metabolism enzyme database

Plagiochila semidecurrens (plagiochila_semidecurrens)

Imported from atlas release summary for Plagiochila semidecurrens.

683
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 188 12 POD (84) View species results
Terpenoid pathway 169 17 BAHD (62) View species results
Alkaloid pathway 132 18 NMT (21) View species results
Flavonoid pathway 85 10 UFGT (42) View species results
Rosmarinic acid pathway 72 7 C4H (35) View species results
Steroid pathway 37 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 633 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 144 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
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Gene Pathway Family Confidence Status Best Target
Psem4433780227470 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Psem4434210228040 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Psem4435570229670 Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
Psem4439980234970 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Psem4440530235700 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Psem4442570238670 Phenylpropanoid POD medium pass POD__00024__sp_Q9SCX8_PPA17_ARATH
Psem4442920239110 Phenylpropanoid POD medium pass POD__00012__sp_Q10N21_APX1_ORYSJ
Psem4443450239600 Phenylpropanoid POD medium pass POD__00002__sp_A5H8G4_PER1_MAIZE
Psem4446900244640 Phenylpropanoid POD medium pass POD__00020__sp_Q9FE01_APX2_ORYSJ
Psem4452810253200 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Psem4452980253450 Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
Psem4453580254500 Phenylpropanoid POD medium pass POD__00003__sp_A9PCL4_PRX2_POPTR
Psem4453990254900 Phenylpropanoid POD medium pass POD__00002__sp_A5H8G4_PER1_MAIZE
Psem4454440255580 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
Psem4458470260730 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Psem4459950263010 Phenylpropanoid POD medium pass POD__00013__sp_Q4W1I8_PER1_ZINEL
Psem4461650265500 Phenylpropanoid POD low borderline POD__00028__sp_Q9ZVD5_AGO4_ARATH
Psem4467330273000 Phenylpropanoid POD low borderline POD__00024__sp_Q9SCX8_PPA17_ARATH
Psem4518550277440 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
Psem4518560277450 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
Psem4637300281970 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
Psem4637300281990 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
Psem4637310282010 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
Psem4637320282030 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
Psem4670780282960 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
Psem4670790282980 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
Psem4692310288010 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Psem4692330288040 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Psem4695900288670 Phenylpropanoid POD medium pass POD__00012__sp_Q10N21_APX1_ORYSJ
Psem4695910288690 Phenylpropanoid POD medium pass POD__00012__sp_Q10N21_APX1_ORYSJ
Psem4711350292950 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
Psem4711360292960 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
Psem4715230294150 Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
Psem4715240294170 Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
Psem5810300310 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
Psem6560303130 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
Psem7010304340 Phenylpropanoid POD low borderline POD__00028__sp_Q9ZVD5_AGO4_ARATH
Psem8170309160 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Psem9980318020 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Psem9980318030 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA