PlantSME Plant secondary metabolism enzyme database

Plagiochila semidecurrens (plagiochila_semidecurrens)

Imported from atlas release summary for Plagiochila semidecurrens.

683
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 188 12 POD (84) View species results
Terpenoid pathway 169 17 BAHD (62) View species results
Alkaloid pathway 132 18 NMT (21) View species results
Flavonoid pathway 85 10 UFGT (42) View species results
Rosmarinic acid pathway 72 7 C4H (35) View species results
Steroid pathway 37 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 633 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 144 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Psem4670780282970 Alkaloid 7DLGT low borderline
Psem4670790282990 Alkaloid 7DLGT low borderline
Psem4678260284480 Alkaloid 7DLGT low borderline
Psem4682070285360 Alkaloid 7DLGT low borderline
Psem4682080285400 Alkaloid 7DLGT low borderline
Psem4850296720 Alkaloid 7DLGT medium pass
Psem7640306700 Alkaloid 7DLGT low borderline
Psem4424160216870 Alkaloid 7DLH medium borderline
Psem4552780278550 Alkaloid 7DLH medium borderline
Psem4552810278570 Alkaloid 7DLH medium borderline
Psem10050000170 Alkaloid 8HGO medium borderline
Psem4047390098110 Alkaloid 8HGO low borderline
Psem4170121070 Alkaloid 8HGO low borderline
Psem4230960128970 Alkaloid 8HGO low borderline
Psem4288190139860 Alkaloid 8HGO medium pass
Psem4311570146030 Alkaloid 8HGO medium borderline
Psem4383980180350 Alkaloid 8HGO medium borderline
Psem4389050184060 Alkaloid 8HGO low borderline
Psem4428750221770 Alkaloid 8HGO medium borderline
Psem4435310229180 Alkaloid 8HGO low borderline
Psem4575020279530 Alkaloid 8HGO medium borderline
Psem4575030279540 Alkaloid 8HGO medium borderline
Psem4704960291310 Alkaloid 8HGO low borderline
Psem4704980291320 Alkaloid 8HGO low borderline
Psem4396920190830 Alkaloid ADC medium pass
Psem4672190283300 Alkaloid ADC low borderline
Psem4672200283330 Alkaloid ADC low borderline
Psem4061420102250 Alkaloid BBE low borderline
Psem4367930170420 Alkaloid BBE low borderline
Psem4442060237760 Alkaloid BBE low borderline
Psem4452940253370 Alkaloid BBE low borderline
Psem4459340262010 Alkaloid BBE low borderline
Psem2911360024150 Alkaloid CNMT low borderline
Psem4286950139600 Alkaloid CNMT low borderline
Psem4320780149310 Alkaloid CNMT low borderline
Psem4320840149380 Alkaloid CNMT low borderline
Psem4366250169630 Alkaloid CNMT low borderline
Psem4408890200900 Alkaloid CNMT medium pass
Psem4413670205890 Alkaloid CNMT medium borderline
Psem4421420213770 Alkaloid CNMT low borderline
Psem4427750220520 Alkaloid CNMT low borderline
Psem4442590238740 Alkaloid CNMT medium pass
Psem4463660268370 Alkaloid CNMT low borderline
Psem4464010269040 Alkaloid CNMT medium pass
Psem4712460293480 Alkaloid CNMT low borderline
Psem4712480293510 Alkaloid CNMT low borderline
Psem4259920133730 Alkaloid CODM/T6ODM medium borderline
Psem4340540156610 Alkaloid CODM/T6ODM medium borderline
Psem4348480160580 Alkaloid CODM/T6ODM medium borderline
Psem4356120164810 Alkaloid CODM/T6ODM medium borderline