PlantSME Plant secondary metabolism enzyme database

Plagiochila semidecurrens (plagiochila_semidecurrens)

Imported from atlas release summary for Plagiochila semidecurrens.

683
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 188 12 POD (84) View species results
Terpenoid pathway 169 17 BAHD (62) View species results
Alkaloid pathway 132 18 NMT (21) View species results
Flavonoid pathway 85 10 UFGT (42) View species results
Rosmarinic acid pathway 72 7 C4H (35) View species results
Steroid pathway 37 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 633 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 144 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Psem4387250183160 Flavonoid C4H medium borderline
Psem4411000203030 Flavonoid C4H medium borderline
Psem4437390231710 Flavonoid C4H medium borderline
Psem4439860234650 Flavonoid C4H medium borderline
Psem4458410260660 Flavonoid C4H medium borderline
Psem4466130271700 Flavonoid C4H low borderline
Psem4712990293530 Flavonoid C4H medium borderline
Psem4713000293560 Flavonoid C4H medium borderline
Psem4347350160010 Flavonoid CHI medium pass
Psem4690790287690 Flavonoid CHI medium pass
Psem4690800287710 Flavonoid CHI medium pass
Psem3453440050010 Flavonoid CHS low borderline
Psem3858930073500 Flavonoid CHS low borderline
Psem3943890083840 Flavonoid CHS medium pass
Psem4104420113100 Flavonoid CHS medium pass
Psem4464760269860 Flavonoid CHS medium pass
Psem4368910171170 Flavonoid DFR medium borderline
Psem4431990225200 Flavonoid DFR medium borderline
Psem5920300620 Flavonoid DFR medium borderline
Psem5920300640 Flavonoid DFR low borderline
Psem3816170069020 Flavonoid F3'5'H/CYP75A medium borderline
Psem4081430107630 Flavonoid F3'5'H/CYP75A medium borderline
Psem4357850165670 Flavonoid F3'5'H/CYP75A low borderline
Psem4395550189430 Flavonoid F3'5'H/CYP75A medium pass
Psem4399480192810 Flavonoid F3'5'H/CYP75A medium borderline
Psem4439140233750 Flavonoid F3'5'H/CYP75A medium borderline
Psem4442170237990 Flavonoid F3'5'H/CYP75A medium borderline
Psem4447070244810 Flavonoid F3'5'H/CYP75A medium borderline
Psem4449720248860 Flavonoid F3'5'H/CYP75A medium borderline
Psem4449720248870 Flavonoid F3'5'H/CYP75A medium borderline
Psem4454950256210 Flavonoid F3'5'H/CYP75A medium borderline
Psem3455700050430 Flavonoid F3'H/CYP75B medium borderline
Psem3560530057750 Flavonoid F3'H/CYP75B low borderline
Psem3786210063960 Flavonoid F3'H/CYP75B low borderline
Psem3948770085190 Flavonoid F3'H/CYP75B medium borderline
Psem3959470089070 Flavonoid F3'H/CYP75B medium borderline
Psem4036980097200 Flavonoid F3'H/CYP75B medium borderline
Psem4079200107020 Flavonoid F3'H/CYP75B medium borderline
Psem4174680121690 Flavonoid F3'H/CYP75B medium borderline
Psem4194570123970 Flavonoid F3'H/CYP75B medium borderline
Psem4194840124040 Flavonoid F3'H/CYP75B low borderline
Psem4272920136610 Flavonoid F3'H/CYP75B medium borderline
Psem4277360137360 Flavonoid F3'H/CYP75B medium borderline
Psem4292040141080 Flavonoid F3'H/CYP75B low borderline
Psem4373580174090 Flavonoid F3'H/CYP75B medium borderline
Psem4380080178410 Flavonoid F3'H/CYP75B medium borderline
Psem4393680187680 Flavonoid F3'H/CYP75B medium borderline
Psem4400410193540 Flavonoid F3'H/CYP75B medium borderline
Psem4407100199240 Flavonoid F3'H/CYP75B medium borderline
Psem4409340201460 Flavonoid F3'H/CYP75B low borderline