PlantSME Plant secondary metabolism enzyme database

Plagiochila semidecurrens (plagiochila_semidecurrens)

Imported from atlas release summary for Plagiochila semidecurrens.

962
Candidate Protein Records
683
Pathway-Level Records
1791
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 188 12 POD (84) View species results
Terpenoid pathway 169 17 BAHD (62) View species results
Alkaloid pathway 132 18 NMT (21) View species results
Flavonoid pathway 85 10 UFGT (42) View species results
Rosmarinic acid pathway 72 7 C4H (35) View species results
Steroid pathway 37 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 633 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 144 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Psem4464350269500 Steroid DWF1 medium pass
Psem10220001020 Steroid DWF4/CYP90B1 medium borderline
Psem2610014490 Steroid DWF4/CYP90B1 low borderline
Psem3120033560 Steroid DWF4/CYP90B1 medium borderline
Psem3120033570 Steroid DWF4/CYP90B1 low borderline
Psem3455700050430 Steroid DWF4/CYP90B1 low borderline
Psem3816170069020 Steroid DWF4/CYP90B1 low borderline
Psem3972580091470 Steroid DWF4/CYP90B1 low borderline
Psem4194570123970 Steroid DWF4/CYP90B1 low borderline
Psem4272920136610 Steroid DWF4/CYP90B1 low borderline
Psem4289460140170 Steroid DWF4/CYP90B1 low borderline
Psem4342520157570 Steroid DWF4/CYP90B1 medium borderline
Psem4343160157830 Steroid DWF4/CYP90B1 low borderline
Psem4349590160980 Steroid DWF4/CYP90B1 medium borderline
Psem4375740175540 Steroid DWF4/CYP90B1 medium borderline
Psem4380080178410 Steroid DWF4/CYP90B1 low borderline
Psem4393680187680 Steroid DWF4/CYP90B1 low borderline
Psem4394820188760 Steroid DWF4/CYP90B1 low borderline
Psem4400410193540 Steroid DWF4/CYP90B1 low borderline
Psem4423120215430 Steroid DWF4/CYP90B1 medium borderline
Psem4424160216870 Steroid DWF4/CYP90B1 low borderline
Psem4425590218000 Steroid DWF4/CYP90B1 low borderline
Psem4426810219270 Steroid DWF4/CYP90B1 low borderline
Psem4437850232180 Steroid DWF4/CYP90B1 low borderline
Psem4439140233750 Steroid DWF4/CYP90B1 low borderline
Psem4440390235510 Steroid DWF4/CYP90B1 low borderline
Psem4442170237990 Steroid DWF4/CYP90B1 low borderline
Psem4447290245040 Steroid DWF4/CYP90B1 low borderline
Psem4459490262330 Steroid DWF4/CYP90B1 low borderline
Psem4463240267870 Steroid DWF4/CYP90B1 low borderline
Psem4466130271700 Steroid DWF4/CYP90B1 medium borderline
Psem4552210278510 Steroid DWF4/CYP90B1 low borderline
Psem4552220278540 Steroid DWF4/CYP90B1 low borderline
Psem4552780278550 Steroid DWF4/CYP90B1 low borderline
Psem4552810278570 Steroid DWF4/CYP90B1 low borderline
Psem4598150280490 Steroid DWF4/CYP90B1 low borderline
Psem4598160280500 Steroid DWF4/CYP90B1 low borderline
Psem4656680282310 Steroid DWF4/CYP90B1 low borderline
Psem4730296350 Steroid DWF4/CYP90B1 low borderline
Psem5020297120 Steroid DWF4/CYP90B1 low borderline
Psem7520306210 Steroid DWF4/CYP90B1 low borderline
Psem1590009430 Steroid DWF5 low borderline
Psem4225270127880 Steroid DWF5 medium pass
Psem4349690161130 Steroid DWF5 medium pass
Psem4688340286880 Steroid DWF5 medium borderline
Psem4688350286890 Steroid DWF5 medium borderline
Psem4261810134190 Steroid DWF7 medium pass
Psem4385000181260 Steroid DWF7 medium pass
Psem4428870221930 Steroid DWF7 medium pass
Psem4404440196830 Steroid FK low borderline