PlantSME Plant secondary metabolism enzyme database

Plagiochila semidecurrens (plagiochila_semidecurrens)

Imported from atlas release summary for Plagiochila semidecurrens.

962
Candidate Protein Records
683
Pathway-Level Records
1791
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 188 12 POD (84) View species results
Terpenoid pathway 169 17 BAHD (62) View species results
Alkaloid pathway 132 18 NMT (21) View species results
Flavonoid pathway 85 10 UFGT (42) View species results
Rosmarinic acid pathway 72 7 C4H (35) View species results
Steroid pathway 37 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 633 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 144 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Psem4404990197330 Steroid FK high pass
Psem4446220243660 Steroid HYD1 high pass
Psem4273850136830 Steroid ROT3/CYP90C1 medium pass
Psem4311940146300 Steroid ROT3/CYP90C1 medium borderline
Psem4269880135760 Steroid SMO1/SMO2 medium pass
Psem4400290193460 Steroid SMO1/SMO2 medium pass
Psem4462770267060 Steroid SMO1/SMO2 medium pass
Psem11660007150 Steroid SMT1/SMT2/SMT3 medium pass
Psem3050032010 Steroid SMT1/SMT2/SMT3 medium pass
Psem3305010041760 Steroid SMT1/SMT2/SMT3 medium pass
Psem3944860084640 Steroid SMT1/SMT2/SMT3 low borderline
Psem4364010168670 Steroid SMT1/SMT2/SMT3 medium pass
Psem4433480226960 Steroid SMT1/SMT2/SMT3 medium pass
Psem4440210235290 Steroid SMT1/SMT2/SMT3 low borderline
Psem4442000237650 Steroid SMT1/SMT2/SMT3 medium pass
Psem4452520252900 Steroid SMT1/SMT2/SMT3 low borderline
Psem4456180257740 Steroid SMT1/SMT2/SMT3 low borderline
Psem4463660268370 Steroid SMT1/SMT2/SMT3 medium pass
Psem4598620280530 Steroid SMT1/SMT2/SMT3 medium pass
Psem4598640280570 Steroid SMT1/SMT2/SMT3 medium pass
Psem4647090282150 Steroid SMT1/SMT2/SMT3 low borderline
Psem4647100282180 Steroid SMT1/SMT2/SMT3 low borderline
Psem4721450295760 Steroid SMT1/SMT2/SMT3 low borderline
Psem4721470295820 Steroid SMT1/SMT2/SMT3 low borderline
Psem5190297680 Steroid SMT1/SMT2/SMT3 low borderline
Psem5190297690 Steroid SMT1/SMT2/SMT3 low borderline
Psem5190297700 Steroid SMT1/SMT2/SMT3 low borderline
Psem5620299400 Steroid SMT1/SMT2/SMT3 low borderline
Psem4113270116980 Steroid SQE low borderline
Psem4245210131360 Steroid SQE medium pass
Psem4337990155590 Steroid SQS/FDFT1 medium pass
Psem4339100156100 Steroid SQS/FDFT1 high pass
Psem4443000239220 Steroid SQS/FDFT1 low borderline
Psem4332720153330 Terpenoid AACT medium borderline
Psem4386930182880 Terpenoid AACT low borderline
Psem4440820236260 Terpenoid AACT low borderline
Psem4443330239550 Terpenoid AACT medium borderline
Psem4467680273420 Terpenoid AACT medium borderline
Psem4536550278160 Terpenoid AACT medium borderline
Psem4536560278170 Terpenoid AACT medium borderline
Psem4684070286240 Terpenoid AACT medium borderline
Psem4684080286310 Terpenoid AACT medium borderline
Psem10390001530 Terpenoid BAHD low borderline
Psem11660007150 Terpenoid BAHD low borderline
Psem2360012320 Terpenoid BAHD low borderline
Psem3231340035800 Terpenoid BAHD medium pass
Psem3305010041760 Terpenoid BAHD medium pass
Psem3459960052000 Terpenoid BAHD medium pass
Psem3505010053830 Terpenoid BAHD medium pass
Psem3525550054980 Terpenoid BAHD low borderline