PlantSME Plant secondary metabolism enzyme database

Plagiochila semidecurrens (plagiochila_semidecurrens)

Imported from atlas release summary for Plagiochila semidecurrens.

683
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 188 12 POD (84) View species results
Terpenoid pathway 169 17 BAHD (62) View species results
Alkaloid pathway 132 18 NMT (21) View species results
Flavonoid pathway 85 10 UFGT (42) View species results
Rosmarinic acid pathway 72 7 C4H (35) View species results
Steroid pathway 37 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 633 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 144 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Psem4416040208630 Alkaloid CODM/T6ODM medium borderline
Psem4424180216880 Alkaloid CODM/T6ODM medium borderline
Psem4435830229890 Alkaloid CODM/T6ODM medium borderline
Psem4089960109810 Alkaloid COR medium pass
Psem4220520127070 Alkaloid COR medium pass
Psem4292270141180 Alkaloid COR medium pass
Psem4309090145230 Alkaloid COR medium pass
Psem4322480149740 Alkaloid COR medium pass
Psem4415100207750 Alkaloid COR medium pass
Psem4439770234590 Alkaloid COR medium pass
Psem4459530262370 Alkaloid COR medium pass
Psem4467440273140 Alkaloid COR medium pass
Psem4720270295610 Alkaloid COR medium pass
Psem4720280295620 Alkaloid COR medium pass
Psem10220001020 Alkaloid CYP719 medium borderline
Psem3455700050420 Alkaloid CYP719 medium borderline
Psem3560530057750 Alkaloid CYP719 medium borderline
Psem4273850136830 Alkaloid CYP719 medium borderline
Psem4375740175540 Alkaloid CYP719 medium borderline
Psem4411000203030 Alkaloid CYP719 medium borderline
Psem4415320207970 Alkaloid CYP719 medium borderline
Psem4420130212510 Alkaloid CYP719 medium borderline
Psem1580009400 Alkaloid CYP80B1 medium borderline
Psem4104810113210 Alkaloid CYP80B1 medium borderline
Psem4194570123970 Alkaloid CYP80B1 medium borderline
Psem4272920136610 Alkaloid CYP80B1 medium borderline
Psem4311940146300 Alkaloid CYP80B1 medium borderline
Psem4380080178410 Alkaloid CYP80B1 medium borderline
Psem4400410193540 Alkaloid CYP80B1 medium borderline
Psem4414070206460 Alkaloid CYP80B1 low borderline
Psem4418780210970 Alkaloid CYP80B1 medium borderline
Psem4433690227220 Alkaloid CYP80B1 low borderline
Psem3273220039420 Alkaloid CYP80F1 low borderline
Psem4277360137360 Alkaloid CYP80F1 medium borderline
Psem4373580174090 Alkaloid CYP80F1 medium borderline
Psem4447070244810 Alkaloid CYP80F1 medium borderline
Psem3455700050430 Alkaloid G8O/G8H medium borderline
Psem3786210063960 Alkaloid G8O/G8H medium borderline
Psem3859390073750 Alkaloid G8O/G8H medium borderline
Psem3948770085190 Alkaloid G8O/G8H medium borderline
Psem4079200107020 Alkaloid G8O/G8H medium borderline
Psem4109070115530 Alkaloid G8O/G8H medium borderline
Psem4140880119370 Alkaloid G8O/G8H medium borderline
Psem4174680121690 Alkaloid G8O/G8H medium borderline
Psem4200200125030 Alkaloid G8O/G8H low borderline
Psem4213300126160 Alkaloid G8O/G8H low borderline
Psem4258290133310 Alkaloid G8O/G8H medium borderline
Psem4330110152280 Alkaloid G8O/G8H low borderline
Psem4353420163290 Alkaloid G8O/G8H medium borderline
Psem4395550189430 Alkaloid G8O/G8H low borderline