PlantSME Plant secondary metabolism enzyme database

Plagiochila semidecurrens (plagiochila_semidecurrens)

Imported from atlas release summary for Plagiochila semidecurrens.

683
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 188 12 POD (84) View species results
Terpenoid pathway 169 17 BAHD (62) View species results
Alkaloid pathway 132 18 NMT (21) View species results
Flavonoid pathway 85 10 UFGT (42) View species results
Rosmarinic acid pathway 72 7 C4H (35) View species results
Steroid pathway 37 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 633 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 144 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Psem4456620258430 Rosmarinic Acid C4H low borderline
Psem4458410260660 Rosmarinic Acid C4H medium pass
Psem4459490262330 Rosmarinic Acid C4H medium pass
Psem4459840262740 Rosmarinic Acid C4H low borderline
Psem4460300263620 Rosmarinic Acid C4H low borderline
Psem4466130271700 Rosmarinic Acid C4H low borderline
Psem4552210278510 Rosmarinic Acid C4H medium pass
Psem4552220278540 Rosmarinic Acid C4H medium pass
Psem4552780278550 Rosmarinic Acid C4H low borderline
Psem4552810278570 Rosmarinic Acid C4H low borderline
Psem4598150280490 Rosmarinic Acid C4H low borderline
Psem4598160280500 Rosmarinic Acid C4H low borderline
Psem4656680282310 Rosmarinic Acid C4H low borderline
Psem4712990293530 Rosmarinic Acid C4H low borderline
Psem4713000293560 Rosmarinic Acid C4H low borderline
Psem4723260296290 Rosmarinic Acid C4H low borderline
Psem4723270296310 Rosmarinic Acid C4H low borderline
Psem4730296350 Rosmarinic Acid C4H medium pass
Psem5020297120 Rosmarinic Acid C4H low borderline
Psem6710303680 Rosmarinic Acid C4H low borderline
Psem7520306210 Rosmarinic Acid C4H medium pass
Psem7580306490 Rosmarinic Acid C4H low borderline
Psem8770311270 Rosmarinic Acid C4H medium pass
Psem4238760129900 Rosmarinic Acid CPR medium pass
Psem4385420181490 Rosmarinic Acid CPR low borderline
Psem4400950193720 Rosmarinic Acid CPR medium pass
Psem4411320203330 Rosmarinic Acid CPR medium pass
Psem4451590251460 Rosmarinic Acid CPR medium pass
Psem2630014620 Rosmarinic Acid HPPR medium pass
Psem4395310189240 Rosmarinic Acid HPPR medium pass
Psem4418590210830 Rosmarinic Acid HPPR medium pass
Psem4455460256820 Rosmarinic Acid HPPR medium pass
Psem2862940017910 Rosmarinic Acid PAL medium pass
Psem3877960075600 Rosmarinic Acid PAL medium pass
Psem4185150122440 Rosmarinic Acid PAL medium pass
Psem4355640164500 Rosmarinic Acid PAL low borderline
Psem4355760164600 Rosmarinic Acid PAL low borderline
Psem4385690181820 Rosmarinic Acid PAL medium pass
Psem4419770212060 Rosmarinic Acid PAL medium pass
Psem4445830243080 Rosmarinic Acid PAL medium pass
Psem4490275950 Rosmarinic Acid PAL high pass
Psem4162770120430 Rosmarinic Acid RAS low borderline
Psem4224290127630 Rosmarinic Acid RAS medium pass
Psem4228150128400 Rosmarinic Acid RAS low borderline
Psem4248100131960 Rosmarinic Acid RAS low borderline
Psem4386610182540 Rosmarinic Acid RAS low borderline
Psem4422070214560 Rosmarinic Acid RAS low borderline
Psem4424050216720 Rosmarinic Acid RAS low borderline
Psem4424050216730 Rosmarinic Acid RAS low borderline
Psem4451640251570 Rosmarinic Acid RAS low borderline