PlantSME Plant secondary metabolism enzyme database

Plagiochila semidecurrens (plagiochila_semidecurrens)

Imported from atlas release summary for Plagiochila semidecurrens.

683
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 188 12 POD (84) View species results
Terpenoid pathway 169 17 BAHD (62) View species results
Alkaloid pathway 132 18 NMT (21) View species results
Flavonoid pathway 85 10 UFGT (42) View species results
Rosmarinic acid pathway 72 7 C4H (35) View species results
Steroid pathway 37 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 633 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 144 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
Psem5190297690 Terpenoid BAHD low borderline
Psem5190297700 Terpenoid BAHD low borderline
Psem6250302040 Terpenoid BAHD low borderline
Psem6270302080 Terpenoid BAHD low borderline
Psem6270302100 Terpenoid BAHD medium pass
Psem7130304510 Terpenoid BAHD medium pass
Psem7350305460 Terpenoid BAHD low borderline
Psem7490306090 Terpenoid BAHD medium pass
Psem8240309610 Terpenoid BAHD low borderline
Psem8330310010 Terpenoid BAHD medium pass
Psem8340310040 Terpenoid BAHD medium pass
Psem8630310850 Terpenoid BAHD medium pass
Psem8820311840 Terpenoid BAHD medium pass
Psem960316280 Terpenoid BAHD medium pass
Psem4241620130390 Terpenoid CMK/IspE high pass
Psem4387210183140 Terpenoid CMK/IspE low borderline
Psem4688500286990 Terpenoid CMK/IspE medium pass
Psem4688510287000 Terpenoid CMK/IspE medium pass
Psem1110004670 Terpenoid CYP71 medium pass
Psem11580006830 Terpenoid CYP71 medium pass
Psem4257140133110 Terpenoid CYP71 low borderline
Psem4304040144120 Terpenoid CYP71 medium pass
Psem4417270209490 Terpenoid CYP71 medium pass
Psem4450480249750 Terpenoid CYP71 medium pass
Psem1580009400 Terpenoid CYP76 medium pass
Psem2610014490 Terpenoid CYP76 medium borderline
Psem3120033560 Terpenoid CYP76 medium borderline
Psem3120033570 Terpenoid CYP76 medium borderline
Psem3455700050420 Terpenoid CYP76 low borderline
Psem3455700050430 Terpenoid CYP76 medium pass
Psem3560530057750 Terpenoid CYP76 medium pass
Psem3644430060550 Terpenoid CYP76 low borderline
Psem3786210063960 Terpenoid CYP76 low borderline
Psem3816170069020 Terpenoid CYP76 medium pass
Psem3859390073750 Terpenoid CYP76 medium borderline
Psem3948770085190 Terpenoid CYP76 medium pass
Psem3959470089070 Terpenoid CYP76 medium pass
Psem3972580091470 Terpenoid CYP76 low borderline
Psem4036980097200 Terpenoid CYP76 medium pass
Psem4079200107020 Terpenoid CYP76 medium pass
Psem4081430107630 Terpenoid CYP76 medium borderline
Psem4104810113210 Terpenoid CYP76 medium pass
Psem4109070115530 Terpenoid CYP76 medium pass
Psem4140880119370 Terpenoid CYP76 medium pass
Psem4174680121690 Terpenoid CYP76 medium pass
Psem4194570123970 Terpenoid CYP76 medium pass
Psem4194840124020 Terpenoid CYP76 medium pass
Psem4200200125030 Terpenoid CYP76 low borderline
Psem4253270132470 Terpenoid CYP76 medium borderline
Psem4258290133310 Terpenoid CYP76 medium borderline