PlantSME Plant secondary metabolism enzyme database

Rhodiola crenulata (rhodiola_crenulata)

Imported from atlas release summary for Rhodiola crenulata.

1486
Candidate Protein Records
1104
Pathway-Level Records
2825
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 310 20 BAHD (138) View species results
Phenylpropanoid pathway 275 11 POD (128) View species results
Alkaloid pathway 201 19 NMT (36) View species results
Flavonoid pathway 137 11 UFGT (69) View species results
Rosmarinic acid pathway 95 7 C4H (36) View species results
Steroid pathway 86 10 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1052 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 210 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Rcrescaffold99320314970 Phenylpropanoid C3'H/CYP98A medium borderline
Rcrescaffold1297570021980 Phenylpropanoid C4H/CYP73A low borderline
Rcrescaffold1376350047770 Phenylpropanoid C4H/CYP73A medium borderline
Rcrescaffold1383530059290 Phenylpropanoid C4H/CYP73A low borderline
Rcrescaffold1384820073280 Phenylpropanoid C4H/CYP73A low borderline
Rcrescaffold1385980089870 Phenylpropanoid C4H/CYP73A low borderline
Rcrescaffold1389780117170 Phenylpropanoid C4H/CYP73A low borderline
Rcrescaffold1391240135100 Phenylpropanoid C4H/CYP73A low borderline
Rcrescaffold15680181800 Phenylpropanoid C4H/CYP73A medium borderline
Rcrescaffold158070182010 Phenylpropanoid C4H/CYP73A low borderline
Rcrescaffold22710211530 Phenylpropanoid C4H/CYP73A low borderline
Rcrescaffold495320264230 Phenylpropanoid C4H/CYP73A low borderline
Rcrescaffold80550302130 Phenylpropanoid C4H/CYP73A low borderline
Rcrescaffold115390009180 Phenylpropanoid CAD low borderline
Rcrescaffold126750017240 Phenylpropanoid CAD low borderline
Rcrescaffold1305090023770 Phenylpropanoid CAD low borderline
Rcrescaffold1305090023800 Phenylpropanoid CAD low borderline
Rcrescaffold1364970040640 Phenylpropanoid CAD medium borderline
Rcrescaffold1381770050420 Phenylpropanoid CAD medium pass
Rcrescaffold1384860074040 Phenylpropanoid CAD low borderline
Rcrescaffold1385820088900 Phenylpropanoid CAD medium borderline
Rcrescaffold1388320109770 Phenylpropanoid CAD medium pass
Rcrescaffold1388320109780 Phenylpropanoid CAD medium pass
Rcrescaffold1388460110440 Phenylpropanoid CAD low borderline
Rcrescaffold1390570126840 Phenylpropanoid CAD medium pass
Rcrescaffold1391810146120 Phenylpropanoid CAD medium pass
Rcrescaffold1393180154580 Phenylpropanoid CAD low borderline
Rcrescaffold1393530155920 Phenylpropanoid CAD medium pass
Rcrescaffold1393830157630 Phenylpropanoid CAD low borderline
Rcrescaffold234030213840 Phenylpropanoid CAD low borderline
Rcrescaffold236580214570 Phenylpropanoid CAD medium borderline
Rcrescaffold2930228530 Phenylpropanoid CAD medium pass
Rcrescaffold295330229920 Phenylpropanoid CAD low borderline
Rcrescaffold334690239790 Phenylpropanoid CAD medium pass
Rcrescaffold43180256740 Phenylpropanoid CAD low borderline
Rcrescaffold5230267460 Phenylpropanoid CAD medium pass
Rcrescaffold640283010 Phenylpropanoid CAD low borderline
Rcrescaffold81400302860 Phenylpropanoid CAD medium pass
Rcrescaffold81400302870 Phenylpropanoid CAD medium pass
Rcrescaffold103650002770 Phenylpropanoid CCR medium borderline
Rcrescaffold1348330031230 Phenylpropanoid CCR medium pass
Rcrescaffold1351420032810 Phenylpropanoid CCR medium pass
Rcrescaffold1355960034910 Phenylpropanoid CCR low borderline
Rcrescaffold1355960034990 Phenylpropanoid CCR medium borderline
Rcrescaffold1376350047320 Phenylpropanoid CCR medium borderline
Rcrescaffold1384660070030 Phenylpropanoid CCR medium borderline
Rcrescaffold1385050078640 Phenylpropanoid CCR medium borderline
Rcrescaffold1386000090010 Phenylpropanoid CCR medium pass
Rcrescaffold1387400102750 Phenylpropanoid CCR medium pass
Rcrescaffold1388300109570 Phenylpropanoid CCR medium borderline