PlantSME Plant secondary metabolism enzyme database

Rhodiola crenulata (rhodiola_crenulata)

Imported from atlas release summary for Rhodiola crenulata.

1486
Candidate Protein Records
1104
Pathway-Level Records
2825
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 310 20 BAHD (138) View species results
Phenylpropanoid pathway 275 11 POD (128) View species results
Alkaloid pathway 201 19 NMT (36) View species results
Flavonoid pathway 137 11 UFGT (69) View species results
Rosmarinic acid pathway 95 7 C4H (36) View species results
Steroid pathway 86 10 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1052 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 210 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Rcrescaffold1390950131820 Rosmarinic Acid RAS low borderline
Rcrescaffold1393500155540 Rosmarinic Acid RAS low borderline
Rcrescaffold27620224580 Rosmarinic Acid RAS low borderline
Rcrescaffold2930228610 Rosmarinic Acid RAS low borderline
Rcrescaffold309020234800 Rosmarinic Acid RAS medium pass
Rcrescaffold31450235550 Rosmarinic Acid RAS medium pass
Rcrescaffold334020239670 Rosmarinic Acid RAS medium pass
Rcrescaffold336940239980 Rosmarinic Acid RAS low borderline
Rcrescaffold62060280740 Rosmarinic Acid RAS medium pass
Rcrescaffold68950290790 Rosmarinic Acid RAS low borderline
Rcrescaffold72730294310 Rosmarinic Acid RAS low borderline
Rcrescaffold755460297360 Rosmarinic Acid RAS medium pass
Rcrescaffold107840005840 Rosmarinic Acid TAT medium pass
Rcrescaffold131420025090 Rosmarinic Acid TAT low borderline
Rcrescaffold1383460058910 Rosmarinic Acid TAT medium pass
Rcrescaffold1385290082860 Rosmarinic Acid TAT medium pass
Rcrescaffold1386280093310 Rosmarinic Acid TAT low borderline
Rcrescaffold1386680096210 Rosmarinic Acid TAT low borderline
Rcrescaffold1387400103030 Rosmarinic Acid TAT medium pass
Rcrescaffold1391410137850 Rosmarinic Acid TAT low borderline
Rcrescaffold1391560142480 Rosmarinic Acid TAT low borderline
Rcrescaffold179260192130 Rosmarinic Acid TAT low borderline
Rcrescaffold234030213140 Rosmarinic Acid TAT medium pass
Rcrescaffold289270227870 Rosmarinic Acid TAT medium pass
Rcrescaffold74780295620 Rosmarinic Acid TAT low borderline
Rcrescaffold7620297860 Rosmarinic Acid TAT medium pass
Rcrescaffold1361080039930 Steroid BR6OX1/CYP85A1 low borderline
Rcrescaffold1376330047090 Steroid BR6OX1/CYP85A1 medium borderline
Rcrescaffold1379820049570 Steroid BR6OX1/CYP85A1 medium borderline
Rcrescaffold1383460058720 Steroid BR6OX1/CYP85A1 medium borderline
Rcrescaffold1384820073280 Steroid BR6OX1/CYP85A1 medium borderline
Rcrescaffold1394010159890 Steroid BR6OX1/CYP85A1 medium borderline
Rcrescaffold1395080168160 Steroid BR6OX1/CYP85A1 medium borderline
Rcrescaffold196410198570 Steroid BR6OX1/CYP85A1 medium borderline
Rcrescaffold29910230800 Steroid BR6OX1/CYP85A1 medium borderline
Rcrescaffold32600237850 Steroid BR6OX1/CYP85A1 medium borderline
Rcrescaffold351420241600 Steroid BR6OX1/CYP85A1 medium borderline
Rcrescaffold368210247180 Steroid BR6OX1/CYP85A1 low borderline
Rcrescaffold38140249800 Steroid BR6OX1/CYP85A1 medium borderline
Rcrescaffold45350259370 Steroid BR6OX1/CYP85A1 medium borderline
Rcrescaffold11320008220 Steroid BR6OX2/CYP85A2 low borderline
Rcrescaffold126180016130 Steroid BR6OX2/CYP85A2 low borderline
Rcrescaffold128720019480 Steroid BR6OX2/CYP85A2 low borderline
Rcrescaffold1297570021970 Steroid BR6OX2/CYP85A2 low borderline
Rcrescaffold130500023680 Steroid BR6OX2/CYP85A2 low borderline
Rcrescaffold130500023690 Steroid BR6OX2/CYP85A2 low borderline
Rcrescaffold130500023700 Steroid BR6OX2/CYP85A2 low borderline
Rcrescaffold1348330030870 Steroid BR6OX2/CYP85A2 low borderline
Rcrescaffold1357560036870 Steroid BR6OX2/CYP85A2 low borderline
Rcrescaffold1361110039940 Steroid BR6OX2/CYP85A2 medium borderline