PlantSME Plant secondary metabolism enzyme database

Spinacia oleracea (spinacia_oleracea)

Imported from atlas release summary for Spinacia oleracea.

1347
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 388 20 BAHD (143) View species results
Phenylpropanoid pathway 319 11 POD (170) View species results
Alkaloid pathway 267 18 7DLGT (52) View species results
Flavonoid pathway 188 11 UFGT (120) View species results
Rosmarinic acid pathway 117 7 C4H (44) View species results
Steroid pathway 68 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1223 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 262 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Sole04G0022260 Alkaloid 7DLH medium borderline
Sole05G0005980 Alkaloid 7DLH medium borderline
Sole05G0006010 Alkaloid 7DLH medium borderline
Sole05G0006030 Alkaloid 7DLH medium borderline
Sole05G0006040 Alkaloid 7DLH medium borderline
Sole05G0011820 Alkaloid 7DLH low borderline
Sole05G0016270 Alkaloid 7DLH medium borderline
Sole05G0016370 Alkaloid 7DLH low borderline
Sole06G0012740 Alkaloid 7DLH medium borderline
Sole06G0012830 Alkaloid 7DLH medium borderline
SoleSpoScf_005210011420 Alkaloid 7DLH low borderline
SoleSpoScf_005210011430 Alkaloid 7DLH low borderline
SoleSpoScf_011430031060 Alkaloid 7DLH medium borderline
SoleSpoScf_016790046280 Alkaloid 7DLH medium pass
SoleSpoScf_016790046290 Alkaloid 7DLH medium borderline
SoleSpoScf_016790046310 Alkaloid 7DLH medium borderline
SoleSpoScf_017220047230 Alkaloid 7DLH medium borderline
Sole02G0000780 Alkaloid 8HGO medium pass
Sole02G0000790 Alkaloid 8HGO medium borderline
Sole02G0017120 Alkaloid 8HGO medium borderline
Sole02G0019330 Alkaloid 8HGO medium borderline
Sole05G0017950 Alkaloid 8HGO low borderline
Sole06G0005560 Alkaloid 8HGO medium borderline
Sole06G0009040 Alkaloid 8HGO medium borderline
SoleSpoScf_002820006200 Alkaloid 8HGO medium borderline
SoleSpoScf_002820006230 Alkaloid 8HGO medium pass
SoleSpoScf_025920063810 Alkaloid 8HGO medium borderline
Sole01G0018800 Alkaloid ADC medium pass
Sole03G0007350 Alkaloid ADC low borderline
SoleSpoScf_011270030230 Alkaloid ADC medium pass
Sole01G0017420 Alkaloid BBE medium borderline
Sole01G0022950 Alkaloid BBE medium borderline
Sole01G0022960 Alkaloid BBE medium borderline
Sole01G0023130 Alkaloid BBE medium borderline
Sole01G0023140 Alkaloid BBE low borderline
Sole01G0023150 Alkaloid BBE medium borderline
Sole02G0005660 Alkaloid BBE medium borderline
Sole03G0025270 Alkaloid BBE low borderline
Sole04G0019060 Alkaloid BBE medium borderline
Sole04G0019080 Alkaloid BBE medium borderline
Sole04G0019090 Alkaloid BBE medium borderline
Sole04G0019100 Alkaloid BBE medium borderline
Sole04G0025460 Alkaloid BBE medium borderline
Sole05G0001580 Alkaloid BBE medium borderline
Sole05G0008030 Alkaloid BBE medium borderline
Sole06G0021550 Alkaloid BBE medium borderline
SoleSpoScf_023980060770 Alkaloid BBE medium borderline
SoleSpoScf_027400065850 Alkaloid BBE medium borderline
SoleSpoScf_033120070890 Alkaloid BBE low borderline
SoleSpoScf_033120070900 Alkaloid BBE medium borderline