PlantSME Plant secondary metabolism enzyme database

Spinacia oleracea (spinacia_oleracea)

Imported from atlas release summary for Spinacia oleracea.

1657
Candidate Protein Records
1347
Pathway-Level Records
3352
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 388 20 BAHD (143) View species results
Phenylpropanoid pathway 319 11 POD (170) View species results
Alkaloid pathway 267 18 7DLGT (52) View species results
Flavonoid pathway 188 11 UFGT (120) View species results
Rosmarinic acid pathway 117 7 C4H (44) View species results
Steroid pathway 68 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1223 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 262 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
SoleSpoScf_048860076890 Alkaloid BBE low borderline
SoleSpoScf_048860076900 Alkaloid BBE medium borderline
Sole01G0003300 Alkaloid CNMT low borderline
Sole01G0011280 Alkaloid CNMT low borderline
Sole01G0013510 Alkaloid CNMT medium borderline
Sole01G0019520 Alkaloid CNMT low borderline
Sole03G0009820 Alkaloid CNMT medium pass
Sole04G0026830 Alkaloid CNMT low borderline
Sole04G0029510 Alkaloid CNMT low borderline
SoleSpoScf_006330014790 Alkaloid CNMT low borderline
SoleSpoScf_011340030680 Alkaloid CNMT low borderline
SoleSuper_scaffold_2010090990 Alkaloid CNMT low borderline
SoleSuper_scaffold_650095030 Alkaloid CNMT medium pass
SoleSuper_scaffold_650095060 Alkaloid CNMT medium pass
Sole01G0004330 Alkaloid CODM/T6ODM medium borderline
Sole01G0008220 Alkaloid CODM/T6ODM medium borderline
Sole01G0020170 Alkaloid CODM/T6ODM medium borderline
Sole01G0021120 Alkaloid CODM/T6ODM medium borderline
Sole01G0024710 Alkaloid CODM/T6ODM medium borderline
Sole02G0002800 Alkaloid CODM/T6ODM medium borderline
Sole02G0005860 Alkaloid CODM/T6ODM medium borderline
Sole02G0005870 Alkaloid CODM/T6ODM medium borderline
Sole02G0005940 Alkaloid CODM/T6ODM medium borderline
Sole02G0005960 Alkaloid CODM/T6ODM medium borderline
Sole02G0005980 Alkaloid CODM/T6ODM medium borderline
Sole02G0005990 Alkaloid CODM/T6ODM medium borderline
Sole02G0006020 Alkaloid CODM/T6ODM medium borderline
Sole02G0007910 Alkaloid CODM/T6ODM medium borderline
Sole02G0012300 Alkaloid CODM/T6ODM medium borderline
Sole02G0012320 Alkaloid CODM/T6ODM medium borderline
Sole02G0012340 Alkaloid CODM/T6ODM medium borderline
Sole02G0012380 Alkaloid CODM/T6ODM medium borderline
Sole02G0013270 Alkaloid CODM/T6ODM medium borderline
Sole02G0018920 Alkaloid CODM/T6ODM medium borderline
Sole02G0022530 Alkaloid CODM/T6ODM medium borderline
Sole03G0000390 Alkaloid CODM/T6ODM medium borderline
Sole03G0001720 Alkaloid CODM/T6ODM medium borderline
Sole03G0006980 Alkaloid CODM/T6ODM medium borderline
Sole03G0008900 Alkaloid CODM/T6ODM medium borderline
Sole03G0008910 Alkaloid CODM/T6ODM medium borderline
Sole03G0008920 Alkaloid CODM/T6ODM medium borderline
Sole03G0008930 Alkaloid CODM/T6ODM medium borderline
Sole03G0008940 Alkaloid CODM/T6ODM medium borderline
Sole03G0008950 Alkaloid CODM/T6ODM medium borderline
Sole03G0008960 Alkaloid CODM/T6ODM medium borderline
Sole03G0008990 Alkaloid CODM/T6ODM medium borderline
Sole03G0009000 Alkaloid CODM/T6ODM medium borderline
Sole03G0010180 Alkaloid CODM/T6ODM medium borderline
Sole03G0010220 Alkaloid CODM/T6ODM medium borderline
Sole03G0010230 Alkaloid CODM/T6ODM low borderline