PlantSME Plant secondary metabolism enzyme database

Spinacia oleracea (spinacia_oleracea)

Imported from atlas release summary for Spinacia oleracea.

1347
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 388 20 BAHD (143) View species results
Phenylpropanoid pathway 319 11 POD (170) View species results
Alkaloid pathway 267 18 7DLGT (52) View species results
Flavonoid pathway 188 11 UFGT (120) View species results
Rosmarinic acid pathway 117 7 C4H (44) View species results
Steroid pathway 68 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1223 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 262 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Sole06G0018570 Rosmarinic Acid C4H low borderline
Sole06G0020610 Rosmarinic Acid C4H low borderline
Sole06G0020620 Rosmarinic Acid C4H low borderline
Sole06G0020630 Rosmarinic Acid C4H low borderline
Sole06G0020640 Rosmarinic Acid C4H medium pass
SoleSpoScf_001460003130 Rosmarinic Acid C4H medium pass
SoleSpoScf_002770005630 Rosmarinic Acid C4H medium pass
SoleSpoScf_004060008000 Rosmarinic Acid C4H low borderline
SoleSpoScf_004090008380 Rosmarinic Acid C4H medium pass
SoleSpoScf_004340009090 Rosmarinic Acid C4H medium pass
SoleSpoScf_005440012250 Rosmarinic Acid C4H medium pass
SoleSpoScf_005440012260 Rosmarinic Acid C4H medium pass
SoleSpoScf_005960013010 Rosmarinic Acid C4H medium pass
SoleSpoScf_006040013540 Rosmarinic Acid C4H medium pass
SoleSpoScf_006600015780 Rosmarinic Acid C4H low borderline
SoleSpoScf_006610015910 Rosmarinic Acid C4H low borderline
SoleSpoScf_006610015920 Rosmarinic Acid C4H low borderline
SoleSpoScf_006680016150 Rosmarinic Acid C4H low borderline
SoleSpoScf_006830016890 Rosmarinic Acid C4H low borderline
SoleSpoScf_007090017680 Rosmarinic Acid C4H low borderline
SoleSpoScf_007280018250 Rosmarinic Acid C4H low borderline
SoleSpoScf_008140020270 Rosmarinic Acid C4H medium pass
SoleSpoScf_008500020930 Rosmarinic Acid C4H medium pass
SoleSpoScf_009480024340 Rosmarinic Acid C4H low borderline
SoleSpoScf_009900025730 Rosmarinic Acid C4H low borderline
SoleSpoScf_010230027150 Rosmarinic Acid C4H low borderline
SoleSpoScf_010640028590 Rosmarinic Acid C4H low borderline
SoleSpoScf_011430031060 Rosmarinic Acid C4H low borderline
SoleSpoScf_011720032120 Rosmarinic Acid C4H low borderline
SoleSpoScf_012480034460 Rosmarinic Acid C4H low borderline
SoleSpoScf_012800035530 Rosmarinic Acid C4H low borderline
SoleSpoScf_012800035540 Rosmarinic Acid C4H medium pass
SoleSpoScf_012800035550 Rosmarinic Acid C4H medium pass
SoleSpoScf_013090036050 Rosmarinic Acid C4H low borderline
SoleSpoScf_013090036060 Rosmarinic Acid C4H low borderline
SoleSpoScf_013320036970 Rosmarinic Acid C4H low borderline
SoleSpoScf_013690037800 Rosmarinic Acid C4H low borderline
SoleSpoScf_015010041990 Rosmarinic Acid C4H low borderline
SoleSpoScf_016350045410 Rosmarinic Acid C4H low borderline
SoleSpoScf_016350045420 Rosmarinic Acid C4H low borderline
SoleSpoScf_016400045580 Rosmarinic Acid C4H low borderline
SoleSpoScf_016790046290 Rosmarinic Acid C4H low borderline
SoleSpoScf_016790046310 Rosmarinic Acid C4H low borderline
SoleSpoScf_017220047200 Rosmarinic Acid C4H low borderline
SoleSpoScf_017220047210 Rosmarinic Acid C4H low borderline
SoleSpoScf_017220047220 Rosmarinic Acid C4H low borderline
SoleSpoScf_017220047250 Rosmarinic Acid C4H low borderline
SoleSpoScf_018080049430 Rosmarinic Acid C4H low borderline
SoleSpoScf_019220051600 Rosmarinic Acid C4H low borderline
SoleSpoScf_021140055530 Rosmarinic Acid C4H low borderline