PlantSME Plant secondary metabolism enzyme database

Spinacia oleracea (spinacia_oleracea)

Imported from atlas release summary for Spinacia oleracea.

1347
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 388 20 BAHD (143) View species results
Phenylpropanoid pathway 319 11 POD (170) View species results
Alkaloid pathway 267 18 7DLGT (52) View species results
Flavonoid pathway 188 11 UFGT (120) View species results
Rosmarinic acid pathway 117 7 C4H (44) View species results
Steroid pathway 68 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1223 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 262 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
SoleSpoScf_023290059650 Rosmarinic Acid C4H low borderline
SoleSpoScf_024370061380 Rosmarinic Acid C4H low borderline
SoleSpoScf_025770063600 Rosmarinic Acid C4H low borderline
SoleSpoScf_027490066000 Rosmarinic Acid C4H low borderline
SoleSpoScf_027830066420 Rosmarinic Acid C4H low borderline
SoleSpoScf_028550067330 Rosmarinic Acid C4H low borderline
SoleSpoScf_029300068060 Rosmarinic Acid C4H medium pass
SoleSpoScf_030180068850 Rosmarinic Acid C4H low borderline
SoleSpoScf_031290069560 Rosmarinic Acid C4H low borderline
SoleSpoScf_031290069570 Rosmarinic Acid C4H medium pass
SoleSpoScf_031550069810 Rosmarinic Acid C4H low borderline
SoleSpoScf_032520070620 Rosmarinic Acid C4H medium pass
SoleSpoScf_032520070630 Rosmarinic Acid C4H low borderline
SoleSpoScf_033360071010 Rosmarinic Acid C4H medium pass
SoleSpoScf_035490072120 Rosmarinic Acid C4H medium pass
SoleSpoScf_037930073510 Rosmarinic Acid C4H medium pass
SoleSpoScf_039200073970 Rosmarinic Acid C4H low borderline
SoleSpoScf_039440074110 Rosmarinic Acid C4H low borderline
SoleSpoScf_049040076930 Rosmarinic Acid C4H low borderline
SoleSpoScf_059080078160 Rosmarinic Acid C4H low borderline
SoleSpoScf_112350080090 Rosmarinic Acid C4H low borderline
SoleSpoScf_123620080290 Rosmarinic Acid C4H low borderline
SoleSuper_scaffold_1240085860 Rosmarinic Acid C4H low borderline
SoleSuper_scaffold_1380087250 Rosmarinic Acid C4H medium pass
SoleSuper_scaffold_650095140 Rosmarinic Acid C4H medium pass
SoleSuper_scaffold_880096830 Rosmarinic Acid C4H medium pass
SoleSuper_scaffold_930097210 Rosmarinic Acid C4H medium pass
Sole01G0005840 Rosmarinic Acid CPR low borderline
Sole01G0010050 Rosmarinic Acid CPR low borderline
Sole02G0015870 Rosmarinic Acid CPR medium pass
Sole03G0012640 Rosmarinic Acid CPR low borderline
Sole03G0014610 Rosmarinic Acid CPR medium pass
Sole03G0019020 Rosmarinic Acid CPR medium pass
Sole06G0013400 Rosmarinic Acid CPR medium pass
SoleSpoScf_009350023790 Rosmarinic Acid CPR medium pass
SoleSpoScf_009480024330 Rosmarinic Acid CPR low borderline
SoleSpoScf_011490031510 Rosmarinic Acid CPR low borderline
SoleSpoScf_033480071060 Rosmarinic Acid CPR low borderline
Sole02G0012350 Rosmarinic Acid HPPR medium pass
Sole02G0012360 Rosmarinic Acid HPPR medium pass
Sole04G0031960 Rosmarinic Acid HPPR medium pass
Sole04G0031970 Rosmarinic Acid HPPR medium pass
Sole04G0031980 Rosmarinic Acid HPPR medium pass
Sole06G0009640 Rosmarinic Acid HPPR medium pass
SoleSpoScf_035030071760 Rosmarinic Acid HPPR medium pass
Sole02G0018060 Rosmarinic Acid PAL low borderline
SoleSuper_scaffold_1530088390 Rosmarinic Acid PAL high pass
Sole01G0017800 Rosmarinic Acid RAS medium pass
Sole01G0017930 Rosmarinic Acid RAS medium pass
Sole02G0001390 Rosmarinic Acid RAS medium pass