PlantSME Plant secondary metabolism enzyme database

Spinacia oleracea (spinacia_oleracea)

Imported from atlas release summary for Spinacia oleracea.

1347
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 388 20 BAHD (143) View species results
Phenylpropanoid pathway 319 11 POD (170) View species results
Alkaloid pathway 267 18 7DLGT (52) View species results
Flavonoid pathway 188 11 UFGT (120) View species results
Rosmarinic acid pathway 117 7 C4H (44) View species results
Steroid pathway 68 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1223 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 262 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
SoleSpoScf_112350080090 Phenylpropanoid C4H/CYP73A low borderline
SoleSuper_scaffold_1240085860 Phenylpropanoid C4H/CYP73A low borderline
Sole01G0000710 Phenylpropanoid CAD low borderline
Sole01G0018700 Phenylpropanoid CAD low borderline
Sole01G0021440 Phenylpropanoid CAD low borderline
Sole02G0002030 Phenylpropanoid CAD low borderline
Sole02G0003470 Phenylpropanoid CAD low borderline
Sole02G0018900 Phenylpropanoid CAD medium borderline
Sole02G0019330 Phenylpropanoid CAD low borderline
Sole03G0009770 Phenylpropanoid CAD medium pass
Sole04G0002660 Phenylpropanoid CAD medium borderline
Sole04G0002670 Phenylpropanoid CAD medium borderline
Sole04G0002680 Phenylpropanoid CAD medium borderline
Sole04G0002690 Phenylpropanoid CAD medium borderline
Sole04G0002700 Phenylpropanoid CAD medium borderline
Sole04G0002710 Phenylpropanoid CAD medium borderline
Sole04G0002720 Phenylpropanoid CAD medium borderline
Sole04G0002730 Phenylpropanoid CAD medium borderline
Sole04G0009960 Phenylpropanoid CAD low borderline
Sole04G0020080 Phenylpropanoid CAD medium borderline
Sole04G0021060 Phenylpropanoid CAD low borderline
Sole04G0021190 Phenylpropanoid CAD low borderline
Sole04G0024730 Phenylpropanoid CAD low borderline
Sole04G0032280 Phenylpropanoid CAD medium borderline
Sole04G0033890 Phenylpropanoid CAD medium pass
Sole05G0017800 Phenylpropanoid CAD low borderline
Sole05G0019760 Phenylpropanoid CAD low borderline
Sole06G0000630 Phenylpropanoid CAD low borderline
Sole06G0005560 Phenylpropanoid CAD low borderline
SoleSpoScf_000430000530 Phenylpropanoid CAD low borderline
SoleSpoScf_004090008270 Phenylpropanoid CAD low borderline
SoleSpoScf_004090008330 Phenylpropanoid CAD low borderline
SoleSpoScf_004090008340 Phenylpropanoid CAD medium borderline
SoleSpoScf_004420009800 Phenylpropanoid CAD medium pass
SoleSpoScf_005970013240 Phenylpropanoid CAD low borderline
SoleSpoScf_006330014820 Phenylpropanoid CAD low borderline
SoleSpoScf_009360023880 Phenylpropanoid CAD medium borderline
SoleSpoScf_009870025650 Phenylpropanoid CAD medium pass
SoleSpoScf_011260030130 Phenylpropanoid CAD low borderline
SoleSpoScf_018110049460 Phenylpropanoid CAD low borderline
SoleSpoScf_018440050020 Phenylpropanoid CAD medium pass
SoleSpoScf_018440050030 Phenylpropanoid CAD medium pass
SoleSpoScf_020770054730 Phenylpropanoid CAD medium pass
SoleSpoScf_020800054770 Phenylpropanoid CAD medium pass
SoleSpoScf_022100057250 Phenylpropanoid CAD low borderline
SoleSpoScf_026680064840 Phenylpropanoid CAD medium borderline
SoleSpoScf_027910066540 Phenylpropanoid CAD low borderline
SoleSpoScf_030010068670 Phenylpropanoid CAD medium borderline
SoleSpoScf_037290073230 Phenylpropanoid CAD medium borderline
SoleSuper_scaffold_1140084620 Phenylpropanoid CAD low borderline