PlantSME Plant secondary metabolism enzyme database

Spinacia oleracea (spinacia_oleracea)

Imported from atlas release summary for Spinacia oleracea.

1657
Candidate Protein Records
1347
Pathway-Level Records
3352
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 388 20 BAHD (143) View species results
Phenylpropanoid pathway 319 11 POD (170) View species results
Alkaloid pathway 267 18 7DLGT (52) View species results
Flavonoid pathway 188 11 UFGT (120) View species results
Rosmarinic acid pathway 117 7 C4H (44) View species results
Steroid pathway 68 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1223 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 262 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
SoleSuper_scaffold_1200085020 Phenylpropanoid CAD medium borderline
SoleSuper_scaffold_2070091270 Phenylpropanoid CAD low borderline
Sole01G0015690 Phenylpropanoid CCR low borderline
Sole03G0008630 Phenylpropanoid CCR medium pass
Sole03G0011610 Phenylpropanoid CCR low borderline
Sole03G0024470 Phenylpropanoid CCR medium borderline
Sole03G0024480 Phenylpropanoid CCR medium borderline
Sole04G0012220 Phenylpropanoid CCR low borderline
Sole04G0030910 Phenylpropanoid CCR medium borderline
Sole06G0016860 Phenylpropanoid CCR medium borderline
Sole06G0019210 Phenylpropanoid CCR medium pass
SoleSpoScf_000920001430 Phenylpropanoid CCR medium pass
SoleSpoScf_008740021700 Phenylpropanoid CCR low borderline
SoleSpoScf_026680064830 Phenylpropanoid CCR medium borderline
SoleSpoScf_053670077620 Phenylpropanoid CCR medium borderline
SoleSpoScf_072610078960 Phenylpropanoid CCR medium pass
SoleSpoScf_102430079860 Phenylpropanoid CCR medium borderline
SoleSpoScf_255240081790 Phenylpropanoid CCR medium pass
SoleSuper_scaffold_1140084660 Phenylpropanoid CCR medium borderline
SoleSuper_scaffold_450093650 Phenylpropanoid CCR medium borderline
Sole01G0026030 Phenylpropanoid CCoAOMT medium pass
Sole03G0027450 Phenylpropanoid CCoAOMT medium pass
Sole04G0032370 Phenylpropanoid CCoAOMT medium pass
Sole06G0007540 Phenylpropanoid CCoAOMT medium pass
SoleSpoScf_014040038980 Phenylpropanoid CCoAOMT medium pass
SoleSpoScf_014040038990 Phenylpropanoid CCoAOMT medium pass
SoleSpoScf_014040039000 Phenylpropanoid CCoAOMT medium pass
SoleSpoScf_037070073150 Phenylpropanoid CCoAOMT medium pass
SoleSuper_scaffold_1430087540 Phenylpropanoid CCoAOMT medium pass
SoleSuper_scaffold_1430087590 Phenylpropanoid CCoAOMT medium pass
Sole01G0009520 Phenylpropanoid COMT medium pass
Sole01G0012700 Phenylpropanoid COMT medium pass
Sole02G0020390 Phenylpropanoid COMT low borderline
Sole02G0022310 Phenylpropanoid COMT medium pass
Sole02G0022320 Phenylpropanoid COMT medium pass
Sole02G0022330 Phenylpropanoid COMT medium pass
Sole03G0003770 Phenylpropanoid COMT medium pass
Sole03G0003920 Phenylpropanoid COMT medium pass
Sole03G0003930 Phenylpropanoid COMT medium pass
Sole03G0006990 Phenylpropanoid COMT medium pass
Sole03G0007010 Phenylpropanoid COMT medium pass
Sole03G0020660 Phenylpropanoid COMT medium pass
Sole03G0027290 Phenylpropanoid COMT low borderline
Sole03G0027940 Phenylpropanoid COMT low borderline
Sole04G0026620 Phenylpropanoid COMT medium pass
Sole05G0002810 Phenylpropanoid COMT low borderline
Sole05G0016260 Phenylpropanoid COMT medium pass
Sole06G0004080 Phenylpropanoid COMT medium pass
Sole06G0015230 Phenylpropanoid COMT medium pass
SoleSpoScf_001490003520 Phenylpropanoid COMT medium pass