PlantSME Plant secondary metabolism enzyme database

Spinacia oleracea (spinacia_oleracea)

Imported from atlas release summary for Spinacia oleracea.

1657
Candidate Protein Records
1347
Pathway-Level Records
3352
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 388 20 BAHD (143) View species results
Phenylpropanoid pathway 319 11 POD (170) View species results
Alkaloid pathway 267 18 7DLGT (52) View species results
Flavonoid pathway 188 11 UFGT (120) View species results
Rosmarinic acid pathway 117 7 C4H (44) View species results
Steroid pathway 68 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1223 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 262 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Sole02G0022490 Alkaloid CYP719 medium borderline
Sole03G0006020 Alkaloid CYP719 medium borderline
Sole01G0025970 Alkaloid CYP80B1 medium borderline
SoleSpoScf_030310068950 Alkaloid CYP80B1 low borderline
Sole01G0027220 Alkaloid CYP80F1 medium borderline
SoleSpoScf_003010006940 Alkaloid CYP80F1 low borderline
Sole01G0006610 Alkaloid G8O/G8H medium borderline
Sole01G0020960 Alkaloid G8O/G8H medium borderline
Sole01G0022030 Alkaloid G8O/G8H medium borderline
Sole02G0015350 Alkaloid G8O/G8H medium borderline
Sole02G0015370 Alkaloid G8O/G8H medium borderline
Sole03G0018480 Alkaloid G8O/G8H medium borderline
Sole03G0022800 Alkaloid G8O/G8H low borderline
Sole04G0018240 Alkaloid G8O/G8H medium borderline
Sole05G0011140 Alkaloid G8O/G8H medium borderline
Sole06G0009540 Alkaloid G8O/G8H medium borderline
Sole06G0009770 Alkaloid G8O/G8H low borderline
Sole06G0012230 Alkaloid G8O/G8H medium borderline
Sole06G0012250 Alkaloid G8O/G8H medium borderline
Sole06G0018570 Alkaloid G8O/G8H medium borderline
Sole06G0020610 Alkaloid G8O/G8H medium borderline
SoleSpoScf_004090008380 Alkaloid G8O/G8H medium borderline
SoleSpoScf_005740012830 Alkaloid G8O/G8H medium borderline
SoleSpoScf_006830016890 Alkaloid G8O/G8H medium borderline
SoleSpoScf_012960035770 Alkaloid G8O/G8H medium borderline
SoleSpoScf_021140055530 Alkaloid G8O/G8H medium borderline
SoleSpoScf_031290069570 Alkaloid G8O/G8H medium borderline
SoleSpoScf_032520070630 Alkaloid G8O/G8H medium borderline
SoleSpoScf_039200073970 Alkaloid G8O/G8H medium borderline
SoleSpoScf_059080078160 Alkaloid G8O/G8H medium borderline
SoleSpoScf_112350080090 Alkaloid G8O/G8H medium borderline
SoleSuper_scaffold_1240085870 Alkaloid G8O/G8H medium borderline
Sole04G0006250 Alkaloid GES medium pass
Sole04G0009960 Alkaloid GES medium pass
Sole04G0009970 Alkaloid GES medium pass
Sole04G0009980 Alkaloid GES medium pass
Sole04G0010020 Alkaloid GES low borderline
Sole04G0021060 Alkaloid GES medium pass
Sole04G0021190 Alkaloid GES medium pass
Sole04G0024730 Alkaloid GES medium pass
Sole04G0032300 Alkaloid GES medium pass
Sole05G0017800 Alkaloid GES low borderline
SoleSpoScf_000430000530 Alkaloid GES medium pass
SoleSpoScf_002060005140 Alkaloid GES medium pass
SoleSpoScf_004090008230 Alkaloid GES medium pass
SoleSpoScf_004090008240 Alkaloid GES medium pass
SoleSpoScf_004090008260 Alkaloid GES medium pass
SoleSpoScf_004090008270 Alkaloid GES medium pass
SoleSpoScf_004090008320 Alkaloid GES medium pass
SoleSpoScf_004090008330 Alkaloid GES medium pass