Spinacia oleracea (spinacia_oleracea)
Imported from atlas release summary for Spinacia oleracea.
1657
Candidate Protein Records
1347
Pathway-Level Records
3352
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
3352
Family-Level Calls
C4H
6.0%
C3'H/CYP98A
5.88%
BAHD
5.73%
POD
5.64%
UGT
4.47%
4CL
3.94%
7DLGT
3.73%
UFGT
3.73%
Other Families
60.89%
More Families (97)
T3O
116
3.46%
IFS
115
3.43%
CYP76
110
3.28%
F3H
109
3.25%
DWF4/CYP90B1
82
2.45%
NMT
81
2.42%
CODM/T6ODM
74
2.21%
F3'H/CYP75B
65
1.94%
BR6OX2/CYP85A2
53
1.58%
CYP71
53
1.58%
CAD
50
1.49%
TRI/TRII
44
1.31%
H6H
44
1.31%
STR
43
1.28%
SMT1/SMT2/SMT3
39
1.16%
HCT
36
1.07%
CYP90D1
35
1.04%
RAS
34
1.01%
COMT
32
0.95%
CAS
32
0.95%
PYKS
30
0.89%
SGD
29
0.87%
SLS
29
0.87%
GS
28
0.84%
G8O/G8H
26
0.78%
PMT
25
0.75%
CSE
25
0.75%
ANR
24
0.72%
IFR
24
0.72%
LAC
24
0.72%
7DLH
22
0.66%
BBE
22
0.66%
GES
22
0.66%
F3'5'H/CYP75A
22
0.66%
TPS
22
0.66%
CYP51G1
20
0.6%
T16H
18
0.54%
CCR
18
0.54%
IO
17
0.51%
16OMT
17
0.51%
FNS
14
0.42%
FPPS
14
0.42%
CHS
13
0.39%
CNMT
12
0.36%
COR
12
0.36%
DFR
12
0.36%
F5H/CYP84A
12
0.36%
NCS
11
0.33%
ANS/LDOX
11
0.33%
CPR
11
0.33%
TAT
11
0.33%
AACT
11
0.33%
MPO
10
0.3%
8HGO
10
0.3%
CCoAOMT
10
0.3%
BR6OX1/CYP85A1
10
0.3%
SQS/FDFT1
10
0.3%
TDC
9
0.27%
CPD/CYP90A1
9
0.27%
DXR
8
0.24%
HPPR
7
0.21%
PAL
6
0.18%
TYDC_DDC
5
0.15%
DET2
5
0.15%
ROT3/CYP90C1
5
0.15%
GGPPS
5
0.15%
DXS
5
0.15%
ISY
4
0.12%
XMT_MXMT_DXMT
4
0.12%
MVK
4
0.12%
LAMT
3
0.09%
ADC
3
0.09%
6OMT_4OMT_SOMT
3
0.09%
CHI
3
0.09%
FLS
3
0.09%
DWF5
3
0.09%
SMO1/SMO2
3
0.09%
SQE
3
0.09%
MVD
3
0.09%
IDI
3
0.09%
HMGR
3
0.09%
MCT/IspD
3
0.09%
CYP80B1
2
0.06%
CYP80F1
2
0.06%
CYP719
2
0.06%
DWF7
2
0.06%
DWF1
2
0.06%
HYD1
2
0.06%
HDS/IspG
2
0.06%
MDS/IspF
2
0.06%
PMK
2
0.06%
FK
1
0.03%
CPI1
1
0.03%
CMK/IspE
1
0.03%
HMGS
1
0.03%
GPPS
1
0.03%
HDR/IspH
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 388 | 20 | BAHD (143) | View species results |
| Phenylpropanoid pathway | 319 | 11 | POD (170) | View species results |
| Alkaloid pathway | 267 | 18 | 7DLGT (52) | View species results |
| Flavonoid pathway | 188 | 11 | UFGT (120) | View species results |
| Rosmarinic acid pathway | 117 | 7 | C4H (44) | View species results |
| Steroid pathway | 68 | 13 | SMT1/SMT2/SMT3 (25) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1223 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 262 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| SoleSpoScf_016400045570 | Alkaloid | GES | medium | pass |
| SoleSpoScf_022100057240 | Alkaloid | GES | medium | pass |
| SoleSpoScf_022100057250 | Alkaloid | GES | medium | pass |
| SoleSpoScf_037290073250 | Alkaloid | GES | medium | pass |
| Sole01G0018700 | Alkaloid | GS | low | borderline |
| Sole01G0021440 | Alkaloid | GS | low | borderline |
| Sole01G0021450 | Alkaloid | GS | low | borderline |
| Sole01G0024510 | Alkaloid | GS | low | borderline |
| Sole02G0003470 | Alkaloid | GS | low | borderline |
| Sole03G0000460 | Alkaloid | GS | low | borderline |
| Sole03G0001920 | Alkaloid | GS | medium | pass |
| Sole03G0009770 | Alkaloid | GS | high | pass |
| Sole04G0010300 | Alkaloid | GS | low | borderline |
| Sole04G0033890 | Alkaloid | GS | high | pass |
| Sole05G0010960 | Alkaloid | GS | medium | pass |
| Sole06G0000630 | Alkaloid | GS | medium | pass |
| SoleSpoScf_004420009800 | Alkaloid | GS | high | pass |
| SoleSpoScf_004420009810 | Alkaloid | GS | medium | pass |
| SoleSpoScf_004420009820 | Alkaloid | GS | medium | pass |
| SoleSpoScf_005970013240 | Alkaloid | GS | low | borderline |
| SoleSpoScf_006330014820 | Alkaloid | GS | low | borderline |
| SoleSpoScf_009870025650 | Alkaloid | GS | high | pass |
| SoleSpoScf_011260030130 | Alkaloid | GS | low | borderline |
| SoleSpoScf_018110049460 | Alkaloid | GS | medium | pass |
| SoleSpoScf_018440050020 | Alkaloid | GS | high | pass |
| SoleSpoScf_018440050030 | Alkaloid | GS | high | pass |
| SoleSpoScf_020770054730 | Alkaloid | GS | high | pass |
| SoleSpoScf_020800054770 | Alkaloid | GS | high | pass |
| SoleSpoScf_027910066540 | Alkaloid | GS | low | borderline |
| SoleSpoScf_049090076950 | Alkaloid | GS | medium | pass |
| SoleSuper_scaffold_1140084620 | Alkaloid | GS | low | borderline |
| SoleSuper_scaffold_2070091270 | Alkaloid | GS | low | borderline |
| Sole01G0008130 | Alkaloid | H6H | low | borderline |
| Sole01G0017780 | Alkaloid | H6H | medium | borderline |
| Sole01G0024720 | Alkaloid | H6H | low | borderline |
| Sole02G0005900 | Alkaloid | H6H | high | pass |
| Sole02G0005910 | Alkaloid | H6H | low | borderline |
| Sole02G0005920 | Alkaloid | H6H | high | pass |
| Sole02G0005930 | Alkaloid | H6H | high | pass |
| Sole02G0005950 | Alkaloid | H6H | low | borderline |
| Sole02G0005970 | Alkaloid | H6H | low | borderline |
| Sole02G0006740 | Alkaloid | H6H | medium | pass |
| Sole02G0009480 | Alkaloid | H6H | medium | borderline |
| Sole02G0012310 | Alkaloid | H6H | low | borderline |
| Sole02G0012330 | Alkaloid | H6H | medium | pass |
| Sole02G0018600 | Alkaloid | H6H | medium | borderline |
| Sole03G0007340 | Alkaloid | H6H | low | borderline |
| Sole03G0010170 | Alkaloid | H6H | medium | pass |
| Sole03G0010200 | Alkaloid | H6H | low | borderline |
| Sole03G0012730 | Alkaloid | H6H | high | pass |