PlantSME Plant secondary metabolism enzyme database

Spinacia oleracea (spinacia_oleracea)

Imported from atlas release summary for Spinacia oleracea.

1657
Candidate Protein Records
1347
Pathway-Level Records
3352
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 388 20 BAHD (143) View species results
Phenylpropanoid pathway 319 11 POD (170) View species results
Alkaloid pathway 267 18 7DLGT (52) View species results
Flavonoid pathway 188 11 UFGT (120) View species results
Rosmarinic acid pathway 117 7 C4H (44) View species results
Steroid pathway 68 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1223 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 262 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
SoleSpoScf_018080049430 Terpenoid CYP76 medium borderline
SoleSpoScf_020050053220 Terpenoid CYP76 low borderline
SoleSpoScf_023290059650 Terpenoid CYP76 low borderline
SoleSpoScf_027490066000 Terpenoid CYP76 low borderline
SoleSpoScf_031290069560 Terpenoid CYP76 low borderline
SoleSpoScf_032520070630 Terpenoid CYP76 medium pass
SoleSpoScf_033360071010 Terpenoid CYP76 medium pass
SoleSpoScf_035490072120 Terpenoid CYP76 medium pass
SoleSpoScf_037930073510 Terpenoid CYP76 medium borderline
SoleSpoScf_039200073970 Terpenoid CYP76 medium borderline
SoleSpoScf_039440074110 Terpenoid CYP76 medium borderline
SoleSpoScf_059080078160 Terpenoid CYP76 medium pass
SoleSpoScf_112350080090 Terpenoid CYP76 medium pass
SoleSuper_scaffold_1240085870 Terpenoid CYP76 medium pass
SoleSuper_scaffold_1380087250 Terpenoid CYP76 medium pass
SoleSuper_scaffold_880096830 Terpenoid CYP76 medium pass
SoleSuper_scaffold_930097210 Terpenoid CYP76 medium pass
Sole03G0023050 Terpenoid DXR low borderline
Sole05G0005410 Terpenoid DXR high pass
SoleSpoScf_010060026720 Terpenoid DXR medium pass
SoleSpoScf_018690050640 Terpenoid DXR low borderline
SoleSpoScf_023280059620 Terpenoid DXR low borderline
SoleSpoScf_048280076740 Terpenoid DXR medium pass
SoleSpoScf_257870081820 Terpenoid DXR medium pass
SoleSuper_scaffold_1260086110 Terpenoid DXR low borderline
Sole03G0014630 Terpenoid DXS medium pass
Sole06G0003290 Terpenoid DXS medium pass
Sole06G0007760 Terpenoid DXS low borderline
SoleSpoScf_007440018570 Terpenoid DXS medium pass
SoleSpoScf_010530027960 Terpenoid DXS medium pass
Sole01G0002470 Terpenoid FPPS medium pass
Sole01G0019920 Terpenoid FPPS medium pass
Sole01G0019930 Terpenoid FPPS medium pass
Sole02G0019420 Terpenoid FPPS medium pass
Sole02G0019470 Terpenoid FPPS medium pass
Sole04G0026660 Terpenoid FPPS medium borderline
Sole05G0001670 Terpenoid FPPS medium pass
Sole05G0021080 Terpenoid FPPS medium pass
Sole06G0010290 Terpenoid FPPS low borderline
Sole06G0012780 Terpenoid FPPS medium pass
Sole06G0018430 Terpenoid FPPS medium pass
SoleSpoScf_008140020260 Terpenoid FPPS medium pass
SoleSpoScf_033240070980 Terpenoid FPPS medium pass
SoleSuper_scaffold_700096080 Terpenoid FPPS medium pass
Sole02G0002890 Terpenoid GGPPS medium borderline
Sole03G0020450 Terpenoid GGPPS medium borderline
Sole04G0029990 Terpenoid GGPPS medium borderline
Sole05G0017160 Terpenoid GGPPS medium borderline
Sole06G0008440 Terpenoid GGPPS medium borderline
SoleSpoScf_006210013960 Terpenoid GPPS low borderline