PlantSME Plant secondary metabolism enzyme database

Spinacia oleracea (spinacia_oleracea)

Imported from atlas release summary for Spinacia oleracea.

1657
Candidate Protein Records
1347
Pathway-Level Records
3352
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 388 20 BAHD (143) View species results
Phenylpropanoid pathway 319 11 POD (170) View species results
Alkaloid pathway 267 18 7DLGT (52) View species results
Flavonoid pathway 188 11 UFGT (120) View species results
Rosmarinic acid pathway 117 7 C4H (44) View species results
Steroid pathway 68 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1223 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 262 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
SoleSpoScf_011820032300 Terpenoid HDR/IspH high pass
Sole02G0007210 Terpenoid HDS/IspG high pass
Sole03G0019780 Terpenoid HDS/IspG low borderline
Sole03G0021160 Terpenoid HMGR low borderline
Sole03G0021170 Terpenoid HMGR medium pass
Sole04G0024290 Terpenoid HMGR medium pass
Sole06G0009370 Terpenoid HMGS high pass
Sole02G0011650 Terpenoid IDI low borderline
Sole04G0000570 Terpenoid IDI medium pass
SoleSuper_scaffold_600094290 Terpenoid IDI low borderline
Sole04G0015120 Terpenoid MCT/IspD low borderline
SoleSuper_scaffold_1490087970 Terpenoid MCT/IspD low borderline
SoleSuper_scaffold_920097110 Terpenoid MCT/IspD high pass
Sole05G0020440 Terpenoid MDS/IspF low borderline
Sole06G0012020 Terpenoid MDS/IspF high pass
Sole02G0000620 Terpenoid MVD low borderline
Sole04G0008730 Terpenoid MVD low borderline
Sole06G0020550 Terpenoid MVD medium pass
Sole03G0010450 Terpenoid MVK low borderline
Sole04G0024020 Terpenoid MVK low borderline
Sole05G0011830 Terpenoid MVK low borderline
SoleSpoScf_031920070150 Terpenoid MVK medium pass
Sole06G0019940 Terpenoid PMK high pass
SoleSuper_scaffold_1570088460 Terpenoid PMK low borderline
Sole04G0006250 Terpenoid TPS medium pass
Sole04G0009960 Terpenoid TPS medium pass
Sole04G0009970 Terpenoid TPS medium pass
Sole04G0009980 Terpenoid TPS medium pass
Sole04G0010020 Terpenoid TPS low borderline
Sole04G0021060 Terpenoid TPS medium pass
Sole04G0021190 Terpenoid TPS medium pass
Sole04G0024730 Terpenoid TPS medium pass
Sole04G0032300 Terpenoid TPS medium pass
Sole05G0017800 Terpenoid TPS medium pass
SoleSpoScf_000430000530 Terpenoid TPS medium pass
SoleSpoScf_002060005140 Terpenoid TPS medium pass
SoleSpoScf_004090008230 Terpenoid TPS medium pass
SoleSpoScf_004090008240 Terpenoid TPS medium pass
SoleSpoScf_004090008260 Terpenoid TPS medium pass
SoleSpoScf_004090008270 Terpenoid TPS medium pass
SoleSpoScf_004090008320 Terpenoid TPS medium pass
SoleSpoScf_004090008330 Terpenoid TPS medium pass
SoleSpoScf_016400045570 Terpenoid TPS medium pass
SoleSpoScf_022100057240 Terpenoid TPS medium pass
SoleSpoScf_022100057250 Terpenoid TPS medium pass
SoleSpoScf_037290073250 Terpenoid TPS medium pass
Sole01G0000060 Terpenoid UGT medium pass
Sole01G0003120 Terpenoid UGT medium pass
Sole01G0008870 Terpenoid UGT medium pass
Sole01G0008880 Terpenoid UGT medium pass