PlantSME Plant secondary metabolism enzyme database

Barbula amplexifolia (barbula_amplexifolia)

Imported from atlas release summary for Barbula amplexifolia.

691
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 180 12 POD (89) View species results
Terpenoid pathway 152 19 BAHD (64) View species results
Alkaloid pathway 132 19 PYKS (28) View species results
Flavonoid pathway 107 11 PAL (27) View species results
Rosmarinic acid pathway 81 7 PAL (27) View species results
Steroid pathway 39 12 CAS (13) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 604 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 113 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
BAampscaffold_40139070 Terpenoid CYP71 medium pass
BAampscaffold_50159100 Terpenoid CYP71 medium pass
BAampscaffold_50160410 Terpenoid CYP71 low borderline
BAampscaffold_50164600 Terpenoid CYP71 medium pass
BAampscaffold_50167340 Terpenoid CYP71 medium pass
BAampscaffold_50175190 Terpenoid CYP71 medium pass
BAampscaffold_60184250 Terpenoid CYP71 low borderline
BAampscaffold_60185080 Terpenoid CYP71 medium pass
BAampscaffold_60197930 Terpenoid CYP71 medium pass
BAampscaffold_70207750 Terpenoid CYP71 medium pass
BAampscaffold_70210410 Terpenoid CYP71 medium pass
BAampscaffold_70214710 Terpenoid CYP71 medium pass
BAampscaffold_80233400 Terpenoid CYP71 medium pass
BAampscaffold_90237700 Terpenoid CYP71 medium pass
BAampscaffold_90240670 Terpenoid CYP71 low borderline
BAampscaffold_90247150 Terpenoid CYP71 medium pass
BAampscaffold_10000340 Terpenoid CYP76 medium borderline
BAampscaffold_100010190 Terpenoid CYP76 medium pass
BAampscaffold_100014290 Terpenoid CYP76 low borderline
BAampscaffold_110033680 Terpenoid CYP76 low borderline
BAampscaffold_110035920 Terpenoid CYP76 medium pass
BAampscaffold_110039800 Terpenoid CYP76 medium borderline
BAampscaffold_110039940 Terpenoid CYP76 medium pass
BAampscaffold_110039950 Terpenoid CYP76 medium borderline
BAampscaffold_110040220 Terpenoid CYP76 medium borderline
BAampscaffold_110042880 Terpenoid CYP76 medium pass
BAampscaffold_120046900 Terpenoid CYP76 medium borderline
BAampscaffold_120048930 Terpenoid CYP76 low borderline
BAampscaffold_120049760 Terpenoid CYP76 medium borderline
BAampscaffold_120058100 Terpenoid CYP76 medium pass
BAampscaffold_130062470 Terpenoid CYP76 low borderline
BAampscaffold_130064470 Terpenoid CYP76 low borderline
BAampscaffold_130064730 Terpenoid CYP76 medium borderline
BAampscaffold_130067430 Terpenoid CYP76 medium borderline
BAampscaffold_130074290 Terpenoid CYP76 low borderline
BAampscaffold_130076340 Terpenoid CYP76 medium borderline
BAampscaffold_160087470 Terpenoid CYP76 medium pass
BAampscaffold_20091260 Terpenoid CYP76 medium borderline
BAampscaffold_20097450 Terpenoid CYP76 medium pass
BAampscaffold_20099150 Terpenoid CYP76 medium borderline
BAampscaffold_20099480 Terpenoid CYP76 medium borderline
BAampscaffold_20113000 Terpenoid CYP76 medium pass
BAampscaffold_20113030 Terpenoid CYP76 medium pass
BAampscaffold_20113050 Terpenoid CYP76 medium pass
BAampscaffold_20115170 Terpenoid CYP76 medium pass
BAampscaffold_20116660 Terpenoid CYP76 medium pass
BAampscaffold_20116980 Terpenoid CYP76 low borderline
BAampscaffold_20117340 Terpenoid CYP76 low borderline
BAampscaffold_30125150 Terpenoid CYP76 medium borderline
BAampscaffold_30125910 Terpenoid CYP76 medium pass