Bonia amplexicaulis (bonia_amplexicaulis)

This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Download candidate protein FASTA for this species

Pathway Coverage

6 Pathways

Terpenoid pathway 28.32% Phenylpropanoid pathway 24.17% Alkaloid pathway 20.2% Flavonoid pathway 12.9% Rosmarinic acid pathway 8.94% Steroid pathway 5.47%

Family Distribution

4958 Family-Level Calls

BAHD 6.9% POD 6.05% C3'H/CYP98A 5.34% C4H 5.14% UGT 4.4% 4CL 4.11% 7DLGT 3.83% UFGT 3.65%

Other Families 60.57%

More Families (96)

IFS 157 3.17% T3O 147 2.96% CYP76 146 2.94% F3H 131 2.64% DWF4/CYP90B1 120 2.42% NMT 115 2.32% F3'H/CYP75B 105 2.12% STR 98 1.98% BR6OX2/CYP85A2 89 1.8% SMT1/SMT2/SMT3 85 1.71% CYP71 74 1.49% CODM/T6ODM 70 1.41% RAS 68 1.37% PMT 65 1.31% PYKS 61 1.23% H6H 61 1.23% CAD 59 1.19% LAC 59 1.19% HCT 59 1.19% CSE 57 1.15% TRI/TRII 51 1.03% TPS 50 1.01% CAS 47 0.95% SLS 46 0.93% G8O/G8H 42 0.85% PAL 42 0.85% IFR 40 0.81% CCR 37 0.75% GS 36 0.73% COMT 36 0.73% T16H 35 0.71% SGD 33 0.67% GES 33 0.67% ANR 33 0.67% 16OMT 29 0.58% CYP90D1 27 0.54% IO 25 0.5% NCS 25 0.5% 8HGO 23 0.46% BR6OX1/CYP85A1 23 0.46% FNS 21 0.42% COR 20 0.4% BBE 20 0.4% F3'5'H/CYP75A 20 0.4% TAT 20 0.4% 7DLH 19 0.38% DFR 19 0.38% CHS 16 0.32% CYP51G1 15 0.3% TYDC_DDC 14 0.28% CCoAOMT 14 0.28% F5H/CYP84A 14 0.28% CPR 11 0.22% GGPPS 11 0.22% FPPS 11 0.22% MPO 10 0.2% SMO1/SMO2 10 0.2% CPD/CYP90A1 10 0.2% CNMT 9 0.18% SQS/FDFT1 9 0.18% HMGR 9 0.18% ODC 8 0.16% CYP80B1 8 0.16% ANS/LDOX 8 0.16% DXS 8 0.16% MVK 8 0.16% AACT 8 0.16% ADC 7 0.14% ROT3/CYP90C1 7 0.14% MCT/IspD 7 0.14% CYP719 6 0.12% TDC 6 0.12% HPPR 6 0.12% DWF1 6 0.12% HMGS 6 0.12% LAMT 5 0.1% ISY 5 0.1% SQE 5 0.1% MVD 5 0.1% IDI 5 0.1% DET2 4 0.08% 6OMT_4OMT_SOMT 3 0.06% CHI 3 0.06% HYD1 3 0.06% DWF7 3 0.06% HDS/IspG 3 0.06% HDR/IspH 3 0.06% MDS/IspF 3 0.06% DXR 3 0.06% DWF5 2 0.04% PMK 2 0.04% CMK/IspE 2 0.04% XMT_MXMT_DXMT 1 0.02% FLS 1 0.02% CPI1 1 0.02% FK 1 0.02%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Pathway-Level Records	Detected Families	Top family	Results
Terpenoid pathway	621	20	BAHD (247)	View species results
Phenylpropanoid pathway	530	12	POD (270)	View species results
Alkaloid pathway	443	24	7DLGT (85)	View species results
Flavonoid pathway	283	12	UFGT (173)	View species results
Rosmarinic acid pathway	196	7	C4H (82)	View species results
Steroid pathway	120	13	SMT1/SMT2/SMT3 (51)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Detected families	Assignment calls	Included families
P450/oxygenase	23	1655	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	469	BAHD, HCT, RAS

Identification Result List

Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: BAHD

Protein/Isoform Record	Pathway	Family	Confidence	Status	Best Target
BOampscaffold4750349000	Terpenoid	BAHD	medium	pass	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
BOampscaffold4750349010	Terpenoid	BAHD	medium	pass	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
BOampscaffold4750349030	Terpenoid	BAHD	low	borderline	BAHD__00007__sp_A0A2Z5CVK5_AT2_CROXC
BOampscaffold490352410	Terpenoid	BAHD	medium	pass	BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
BOampscaffold490352980	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
BOampscaffold490353220	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
BOampscaffold4940354040	Terpenoid	BAHD	medium	pass	BAHD__00007__sp_A0A2Z5CVK5_AT2_CROXC
BOampscaffold4940354890	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH
BOampscaffold5000364860	Terpenoid	BAHD	medium	pass	BAHD__00007__sp_A0A2Z5CVK5_AT2_CROXC
BOampscaffold50360890	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH
BOampscaffold50361500	Terpenoid	BAHD	medium	pass	BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
BOampscaffold50362010	Terpenoid	BAHD	medium	pass	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
BOampscaffold51410367500	Terpenoid	BAHD	low	borderline	BAHD__00002__sp_A0A068BIF1_AT9_ACTER
BOampscaffold5200368430	Terpenoid	BAHD	medium	pass	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
BOampscaffold530372580	Terpenoid	BAHD	medium	pass	BAHD__00048__sp_Q5M757_ZDH15_ARATH
BOampscaffold5310374740	Terpenoid	BAHD	medium	pass	BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
BOampscaffold5390376640	Terpenoid	BAHD	medium	pass	BAHD__00055__sp_Q8H780_SCP13_ARATH
BOampscaffold5390376650	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH
BOampscaffold560378910	Terpenoid	BAHD	medium	pass	BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
BOampscaffold560379290	Terpenoid	BAHD	medium	pass	BAHD__00005__sp_A0A161IUT7_DGAT1_CORAE
BOampscaffold610387900	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
BOampscaffold6130388160	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
BOampscaffold630391030	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH
BOampscaffold6480392420	Terpenoid	BAHD	medium	pass	BAHD__00022__sp_K7PEY4_RAM2_MEDTR
BOampscaffold6480392610	Terpenoid	BAHD	medium	pass	BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
BOampscaffold6480392690	Terpenoid	BAHD	medium	pass	BAHD__00062__sp_Q93V61_LCAT3_ARATH
BOampscaffold6480392980	Terpenoid	BAHD	medium	pass	BAHD__00023__sp_O22975_LPAAT_ARATH
BOampscaffold6850397580	Terpenoid	BAHD	medium	pass	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
BOampscaffold7070399370	Terpenoid	BAHD	low	borderline	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
BOampscaffold7070399950	Terpenoid	BAHD	medium	pass	BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH
BOampscaffold710400640	Terpenoid	BAHD	low	borderline	BAHD__00028__sp_O80467_SDT_ARATH
BOampscaffold7380402920	Terpenoid	BAHD	medium	pass	BAHD__00055__sp_Q8H780_SCP13_ARATH
BOampscaffold740403130	Terpenoid	BAHD	medium	pass	BAHD__00022__sp_K7PEY4_RAM2_MEDTR
BOampscaffold740403350	Terpenoid	BAHD	low	borderline	BAHD__00081__sp_Q9LJB4_5MAT_ARATH
BOampscaffold7430404640	Terpenoid	BAHD	medium	pass	BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
BOampscaffold7430405260	Terpenoid	BAHD	medium	pass	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
BOampscaffold7460407180	Terpenoid	BAHD	medium	pass	BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
BOampscaffold750407710	Terpenoid	BAHD	medium	pass	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
BOampscaffold750407730	Terpenoid	BAHD	medium	pass	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
BOampscaffold750407740	Terpenoid	BAHD	medium	pass	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
BOampscaffold750407750	Terpenoid	BAHD	medium	pass	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
BOampscaffold75850408100	Terpenoid	BAHD	medium	pass	BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
BOampscaffold7650408780	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
BOampscaffold7760409940	Terpenoid	BAHD	low	borderline	BAHD__00068__sp_Q9C533_ZDHC1_ARATH
BOampscaffold7760411590	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH
BOampscaffold7760413110	Terpenoid	BAHD	medium	pass	BAHD__00081__sp_Q9LJB4_5MAT_ARATH
BOampscaffold780413370	Terpenoid	BAHD	medium	pass	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
BOampscaffold78380416700	Terpenoid	BAHD	medium	pass	BAHD__00008__sp_A0A2Z5CVQ4_AT1_CROXC
BOampscaffold7910417360	Terpenoid	BAHD	low	borderline	BAHD__00014__sp_B9RK42_GPC1_RICCO
BOampscaffold7930417770	Terpenoid	BAHD	medium	pass	BAHD__00007__sp_A0A2Z5CVK5_AT2_CROXC