PlantSME Plant secondary metabolism enzyme database

Bonia amplexicaulis (bonia_amplexicaulis)

Imported from atlas release summary for Bonia amplexicaulis.

2193
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 621 20 BAHD (247) View species results
Phenylpropanoid pathway 530 12 POD (270) View species results
Alkaloid pathway 443 24 7DLGT (85) View species results
Flavonoid pathway 283 12 UFGT (173) View species results
Rosmarinic acid pathway 196 7 C4H (82) View species results
Steroid pathway 120 13 SMT1/SMT2/SMT3 (51) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1655 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 469 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP90D1
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Gene Pathway Family Confidence Status
BOampscaffold10060023570 Steroid CYP90D1 low borderline
BOampscaffold101000024540 Steroid CYP90D1 medium borderline
BOampscaffold1020025320 Steroid CYP90D1 low borderline
BOampscaffold115070049960 Steroid CYP90D1 medium pass
BOampscaffold1210055530 Steroid CYP90D1 medium borderline
BOampscaffold14490085160 Steroid CYP90D1 low borderline
BOampscaffold1560097300 Steroid CYP90D1 low borderline
BOampscaffold160104200 Steroid CYP90D1 low borderline
BOampscaffold16770120750 Steroid CYP90D1 medium borderline
BOampscaffold17140123880 Steroid CYP90D1 low borderline
BOampscaffold1880141540 Steroid CYP90D1 low borderline
BOampscaffold1980154380 Steroid CYP90D1 low borderline
BOampscaffold22620184970 Steroid CYP90D1 low borderline
BOampscaffold2280188020 Steroid CYP90D1 low borderline
BOampscaffold27630216560 Steroid CYP90D1 low borderline
BOampscaffold27630216580 Steroid CYP90D1 low borderline
BOampscaffold280222270 Steroid CYP90D1 medium borderline
BOampscaffold280225370 Steroid CYP90D1 medium borderline
BOampscaffold2860228250 Steroid CYP90D1 low borderline
BOampscaffold30235810 Steroid CYP90D1 low borderline
BOampscaffold30235820 Steroid CYP90D1 medium borderline
BOampscaffold4940354470 Steroid CYP90D1 low borderline
BOampscaffold50070365730 Steroid CYP90D1 low borderline
BOampscaffold630390530 Steroid CYP90D1 low borderline
BOampscaffold630390940 Steroid CYP90D1 low borderline
BOampscaffold7760412390 Steroid CYP90D1 low borderline
BOampscaffold9310460340 Steroid CYP90D1 low borderline