PlantSME Plant secondary metabolism enzyme database

Bonia amplexicaulis (bonia_amplexicaulis)

Imported from atlas release summary for Bonia amplexicaulis.

2193
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 621 20 BAHD (247) View species results
Phenylpropanoid pathway 530 12 POD (270) View species results
Alkaloid pathway 443 24 7DLGT (85) View species results
Flavonoid pathway 283 12 UFGT (173) View species results
Rosmarinic acid pathway 196 7 C4H (82) View species results
Steroid pathway 120 13 SMT1/SMT2/SMT3 (51) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1655 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 469 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
BOampC108772370005550 Alkaloid GS medium pass
BOampscaffold10040020310 Alkaloid GS low borderline
BOampscaffold1020025450 Alkaloid GS medium pass
BOampscaffold10470030960 Alkaloid GS low borderline
BOampscaffold1070034920 Alkaloid GS low borderline
BOampscaffold12140057000 Alkaloid GS high pass
BOampscaffold140078540 Alkaloid GS high pass
BOampscaffold14430084260 Alkaloid GS low borderline
BOampscaffold16010105230 Alkaloid GS low borderline
BOampscaffold160104990 Alkaloid GS high pass
BOampscaffold18690141170 Alkaloid GS low borderline
BOampscaffold1930144510 Alkaloid GS low borderline
BOampscaffold19980155520 Alkaloid GS high pass
BOampscaffold2100173000 Alkaloid GS low borderline
BOampscaffold21480174850 Alkaloid GS low borderline
BOampscaffold22220179200 Alkaloid GS high pass
BOampscaffold2490203620 Alkaloid GS low borderline
BOampscaffold26080210320 Alkaloid GS medium pass
BOampscaffold280220820 Alkaloid GS high pass
BOampscaffold290231290 Alkaloid GS low borderline
BOampscaffold3210257460 Alkaloid GS high pass
BOampscaffold350277390 Alkaloid GS high pass
BOampscaffold350277400 Alkaloid GS high pass
BOampscaffold4470321520 Alkaloid GS high pass
BOampscaffold460333460 Alkaloid GS low borderline
BOampscaffold4720348850 Alkaloid GS high pass
BOampscaffold6380391440 Alkaloid GS high pass
BOampscaffold6480392330 Alkaloid GS low borderline
BOampscaffold6930397950 Alkaloid GS high pass
BOampscaffold710400780 Alkaloid GS low borderline
BOampscaffold7430405900 Alkaloid GS low borderline
BOampscaffold7430405910 Alkaloid GS high pass
BOampscaffold8870439120 Alkaloid GS low borderline
BOampscaffold900442530 Alkaloid GS high pass
BOampscaffold9160453870 Alkaloid GS medium pass
BOampscaffold9990469630 Alkaloid GS low borderline