PlantSME Plant secondary metabolism enzyme database

Bonia amplexicaulis (bonia_amplexicaulis)

Imported from atlas release summary for Bonia amplexicaulis.

2193
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 621 20 BAHD (247) View species results
Phenylpropanoid pathway 530 12 POD (270) View species results
Alkaloid pathway 443 24 7DLGT (85) View species results
Flavonoid pathway 283 12 UFGT (173) View species results
Rosmarinic acid pathway 196 7 C4H (82) View species results
Steroid pathway 120 13 SMT1/SMT2/SMT3 (51) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1655 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 469 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
BOampscaffold10013080 Alkaloid IO medium borderline
BOampscaffold1130045340 Alkaloid IO medium borderline
BOampscaffold1130048110 Alkaloid IO medium borderline
BOampscaffold12790065050 Alkaloid IO medium pass
BOampscaffold160103740 Alkaloid IO medium borderline
BOampscaffold17140123880 Alkaloid IO medium borderline
BOampscaffold1750130360 Alkaloid IO medium borderline
BOampscaffold19720147130 Alkaloid IO medium borderline
BOampscaffold2100172820 Alkaloid IO medium borderline
BOampscaffold280222260 Alkaloid IO low borderline
BOampscaffold29470233630 Alkaloid IO medium borderline
BOampscaffold3230264280 Alkaloid IO medium pass
BOampscaffold350274050 Alkaloid IO medium borderline
BOampscaffold390298740 Alkaloid IO medium borderline
BOampscaffold4280314210 Alkaloid IO medium borderline
BOampscaffold4590328140 Alkaloid IO medium borderline
BOampscaffold460332030 Alkaloid IO medium borderline
BOampscaffold46980344150 Alkaloid IO medium borderline
BOampscaffold490352860 Alkaloid IO medium borderline
BOampscaffold50358800 Alkaloid IO medium borderline
BOampscaffold50361070 Alkaloid IO medium pass
BOampscaffold62550389570 Alkaloid IO low borderline
BOampscaffold6480393240 Alkaloid IO medium borderline
BOampscaffold7820416270 Alkaloid IO medium borderline
BOampscaffold9080446300 Alkaloid IO medium borderline