PlantSME Plant secondary metabolism enzyme database

Bonia amplexicaulis (bonia_amplexicaulis)

Imported from atlas release summary for Bonia amplexicaulis.

2193
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 621 20 BAHD (247) View species results
Phenylpropanoid pathway 530 12 POD (270) View species results
Alkaloid pathway 443 24 7DLGT (85) View species results
Flavonoid pathway 283 12 UFGT (173) View species results
Rosmarinic acid pathway 196 7 C4H (82) View species results
Steroid pathway 120 13 SMT1/SMT2/SMT3 (51) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1655 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 469 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
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Gene Pathway Family Confidence Status
BOampscaffold100017580 Alkaloid H6H medium borderline
BOampscaffold1060033460 Alkaloid H6H medium borderline
BOampscaffold1060033480 Alkaloid H6H medium borderline
BOampscaffold1070035360 Alkaloid H6H low borderline
BOampscaffold13470072390 Alkaloid H6H low borderline
BOampscaffold14010080350 Alkaloid H6H low borderline
BOampscaffold14160081260 Alkaloid H6H medium borderline
BOampscaffold14160081870 Alkaloid H6H low borderline
BOampscaffold16770121610 Alkaloid H6H medium pass
BOampscaffold16770121620 Alkaloid H6H medium pass
BOampscaffold1820138480 Alkaloid H6H low borderline
BOampscaffold2090166680 Alkaloid H6H medium borderline
BOampscaffold21470174620 Alkaloid H6H low borderline
BOampscaffold21820176980 Alkaloid H6H low borderline
BOampscaffold22330182780 Alkaloid H6H medium borderline
BOampscaffold23580193700 Alkaloid H6H low borderline
BOampscaffold23820194230 Alkaloid H6H low borderline
BOampscaffold24880203570 Alkaloid H6H low borderline
BOampscaffold2550207340 Alkaloid H6H low borderline
BOampscaffold280219240 Alkaloid H6H high pass
BOampscaffold2950234720 Alkaloid H6H low borderline
BOampscaffold30230242410 Alkaloid H6H low borderline
BOampscaffold30240100 Alkaloid H6H low borderline
BOampscaffold310253520 Alkaloid H6H medium borderline
BOampscaffold31080255230 Alkaloid H6H medium borderline
BOampscaffold32190257890 Alkaloid H6H low borderline
BOampscaffold3230261960 Alkaloid H6H medium pass
BOampscaffold350276270 Alkaloid H6H medium borderline
BOampscaffold350276280 Alkaloid H6H low borderline
BOampscaffold3740287750 Alkaloid H6H low borderline
BOampscaffold3740288310 Alkaloid H6H low borderline
BOampscaffold37960293380 Alkaloid H6H medium borderline
BOampscaffold3980304400 Alkaloid H6H high pass
BOampscaffold3980306540 Alkaloid H6H low borderline
BOampscaffold4340317720 Alkaloid H6H medium pass
BOampscaffold4340317730 Alkaloid H6H medium pass
BOampscaffold43840318990 Alkaloid H6H low borderline
BOampscaffold450321790 Alkaloid H6H low borderline
BOampscaffold450321810 Alkaloid H6H low borderline
BOampscaffold460333110 Alkaloid H6H low borderline
BOampscaffold460336080 Alkaloid H6H low borderline
BOampscaffold460340240 Alkaloid H6H medium borderline
BOampscaffold4690343060 Alkaloid H6H medium pass
BOampscaffold470346180 Alkaloid H6H low borderline
BOampscaffold5000363810 Alkaloid H6H medium borderline
BOampscaffold5000363820 Alkaloid H6H medium borderline
BOampscaffold50361330 Alkaloid H6H medium borderline
BOampscaffold50361340 Alkaloid H6H medium borderline
BOampscaffold5060366050 Alkaloid H6H low borderline
BOampscaffold530371350 Alkaloid H6H medium pass