PlantSME Plant secondary metabolism enzyme database

Bonia amplexicaulis (bonia_amplexicaulis)

Imported from atlas release summary for Bonia amplexicaulis.

2193
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 621 20 BAHD (247) View species results
Phenylpropanoid pathway 530 12 POD (270) View species results
Alkaloid pathway 443 24 7DLGT (85) View species results
Flavonoid pathway 283 12 UFGT (173) View species results
Rosmarinic acid pathway 196 7 C4H (82) View species results
Steroid pathway 120 13 SMT1/SMT2/SMT3 (51) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1655 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 469 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
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Gene Pathway Family Confidence Status Best Target
BOampC108557190004750 Flavonoid PAL medium pass PAL__00002__sp_P35510_PAL1_ARATH
BOampscaffold10960039010 Flavonoid PAL high pass PAL__00008__sp_Q8VXG7_PALY_MAIZE
BOampscaffold10960039020 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BOampscaffold150090820 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BOampscaffold150090830 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BOampscaffold150090840 Flavonoid PAL low borderline PAL__00008__sp_Q8VXG7_PALY_MAIZE
BOampscaffold1610107950 Flavonoid PAL high pass PAL__00008__sp_Q8VXG7_PALY_MAIZE
BOampscaffold1610107960 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BOampscaffold280223890 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BOampscaffold280223900 Flavonoid PAL high pass PAL__00008__sp_Q8VXG7_PALY_MAIZE
BOampscaffold310248490 Flavonoid PAL high pass PAL__00008__sp_Q8VXG7_PALY_MAIZE
BOampscaffold310248500 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BOampscaffold5380376450 Flavonoid PAL high pass PAL__00008__sp_Q8VXG7_PALY_MAIZE
BOampscaffold5380376460 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BOampC108557190004750 Phenylpropanoid PAL medium pass PAL__00002__sp_P35510_PAL1_ARATH
BOampscaffold10960039010 Phenylpropanoid PAL high pass PAL__00008__sp_Q8VXG7_PALY_MAIZE
BOampscaffold10960039020 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BOampscaffold150090820 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BOampscaffold150090830 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BOampscaffold150090840 Phenylpropanoid PAL low borderline PAL__00008__sp_Q8VXG7_PALY_MAIZE
BOampscaffold1610107950 Phenylpropanoid PAL high pass PAL__00008__sp_Q8VXG7_PALY_MAIZE
BOampscaffold1610107960 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BOampscaffold280223890 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BOampscaffold280223900 Phenylpropanoid PAL high pass PAL__00008__sp_Q8VXG7_PALY_MAIZE
BOampscaffold310248490 Phenylpropanoid PAL high pass PAL__00008__sp_Q8VXG7_PALY_MAIZE
BOampscaffold310248500 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BOampscaffold5380376450 Phenylpropanoid PAL high pass PAL__00008__sp_Q8VXG7_PALY_MAIZE
BOampscaffold5380376460 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BOampC108557190004750 Rosmarinic Acid PAL medium pass PAL__00002__sp_P35510_PAL1_ARATH
BOampscaffold10960039010 Rosmarinic Acid PAL high pass PAL__00008__sp_Q8VXG7_PALY_MAIZE
BOampscaffold10960039020 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BOampscaffold150090820 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BOampscaffold150090830 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BOampscaffold150090840 Rosmarinic Acid PAL low borderline PAL__00008__sp_Q8VXG7_PALY_MAIZE
BOampscaffold1610107950 Rosmarinic Acid PAL high pass PAL__00008__sp_Q8VXG7_PALY_MAIZE
BOampscaffold1610107960 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BOampscaffold280223890 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BOampscaffold280223900 Rosmarinic Acid PAL high pass PAL__00008__sp_Q8VXG7_PALY_MAIZE
BOampscaffold310248490 Rosmarinic Acid PAL high pass PAL__00008__sp_Q8VXG7_PALY_MAIZE
BOampscaffold310248500 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
BOampscaffold5380376450 Rosmarinic Acid PAL high pass PAL__00008__sp_Q8VXG7_PALY_MAIZE
BOampscaffold5380376460 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR