PlantSME Plant secondary metabolism enzyme database

Bonia amplexicaulis (bonia_amplexicaulis)

Imported from atlas release summary for Bonia amplexicaulis.

2193
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 621 20 BAHD (247) View species results
Phenylpropanoid pathway 530 12 POD (270) View species results
Alkaloid pathway 443 24 7DLGT (85) View species results
Flavonoid pathway 283 12 UFGT (173) View species results
Rosmarinic acid pathway 196 7 C4H (82) View species results
Steroid pathway 120 13 SMT1/SMT2/SMT3 (51) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1655 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 469 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: RAS
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Gene Pathway Family Confidence Status
BOampscaffold100015900 Rosmarinic Acid RAS low borderline
BOampscaffold10460030280 Rosmarinic Acid RAS low borderline
BOampscaffold1060034310 Rosmarinic Acid RAS low borderline
BOampscaffold10960038440 Rosmarinic Acid RAS medium pass
BOampscaffold11270044860 Rosmarinic Acid RAS low borderline
BOampscaffold1130046530 Rosmarinic Acid RAS low borderline
BOampscaffold130069450 Rosmarinic Acid RAS medium pass
BOampscaffold140076300 Rosmarinic Acid RAS low borderline
BOampscaffold140076420 Rosmarinic Acid RAS low borderline
BOampscaffold14490085040 Rosmarinic Acid RAS medium pass
BOampscaffold14490085050 Rosmarinic Acid RAS medium pass
BOampscaffold160101700 Rosmarinic Acid RAS low borderline
BOampscaffold1610107510 Rosmarinic Acid RAS medium pass
BOampscaffold1660117790 Rosmarinic Acid RAS medium pass
BOampscaffold20520162250 Rosmarinic Acid RAS medium pass
BOampscaffold2230180840 Rosmarinic Acid RAS low borderline
BOampscaffold2230181570 Rosmarinic Acid RAS medium pass
BOampscaffold2280186280 Rosmarinic Acid RAS medium pass
BOampscaffold2280188430 Rosmarinic Acid RAS low borderline
BOampscaffold2340192640 Rosmarinic Acid RAS low borderline
BOampscaffold2550206530 Rosmarinic Acid RAS low borderline
BOampscaffold2600210020 Rosmarinic Acid RAS low borderline
BOampscaffold2700214610 Rosmarinic Acid RAS low borderline
BOampscaffold2700214620 Rosmarinic Acid RAS low borderline
BOampscaffold280219150 Rosmarinic Acid RAS medium pass
BOampscaffold280224400 Rosmarinic Acid RAS medium pass
BOampscaffold28070225910 Rosmarinic Acid RAS low borderline
BOampscaffold2950234090 Rosmarinic Acid RAS low borderline
BOampscaffold30239270 Rosmarinic Acid RAS low borderline
BOampscaffold310248020 Rosmarinic Acid RAS medium pass
BOampscaffold3230259360 Rosmarinic Acid RAS low borderline
BOampscaffold350273490 Rosmarinic Acid RAS medium pass
BOampscaffold3890296990 Rosmarinic Acid RAS low borderline
BOampscaffold3950299550 Rosmarinic Acid RAS low borderline
BOampscaffold4020308020 Rosmarinic Acid RAS low borderline
BOampscaffold4280313720 Rosmarinic Acid RAS medium pass
BOampscaffold42850315060 Rosmarinic Acid RAS low borderline
BOampscaffold4470321500 Rosmarinic Acid RAS low borderline
BOampscaffold4590329690 Rosmarinic Acid RAS low borderline
BOampscaffold470347110 Rosmarinic Acid RAS low borderline
BOampscaffold4750348990 Rosmarinic Acid RAS medium pass
BOampscaffold4750349000 Rosmarinic Acid RAS medium pass
BOampscaffold4750349010 Rosmarinic Acid RAS medium pass
BOampscaffold4750349030 Rosmarinic Acid RAS medium pass
BOampscaffold4940354040 Rosmarinic Acid RAS low borderline
BOampscaffold5000364860 Rosmarinic Acid RAS low borderline
BOampscaffold50362010 Rosmarinic Acid RAS medium pass
BOampscaffold5310374740 Rosmarinic Acid RAS medium pass
BOampscaffold5800383940 Rosmarinic Acid RAS low borderline
BOampscaffold6720396670 Rosmarinic Acid RAS low borderline