PlantSME Plant secondary metabolism enzyme database

Bonia amplexicaulis (bonia_amplexicaulis)

Imported from atlas release summary for Bonia amplexicaulis.

2193
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 621 20 BAHD (247) View species results
Phenylpropanoid pathway 530 12 POD (270) View species results
Alkaloid pathway 443 24 7DLGT (85) View species results
Flavonoid pathway 283 12 UFGT (173) View species results
Rosmarinic acid pathway 196 7 C4H (82) View species results
Steroid pathway 120 13 SMT1/SMT2/SMT3 (51) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1655 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 469 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CCR
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Gene Pathway Family Confidence Status Best Target
BOampscaffold10310029160 Phenylpropanoid CCR medium pass CCR__00001__sp_A0A059TC02_CCR1_PETHY
BOampscaffold10810036820 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
BOampscaffold11120043200 Phenylpropanoid CCR medium borderline CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
BOampscaffold12320060890 Phenylpropanoid CCR medium borderline CCR__00006__sp_Q6K9A2_CCR1_ORYSJ
BOampscaffold12430061340 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
BOampscaffold13470072500 Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
BOampscaffold14490085030 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
BOampscaffold16280113460 Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
BOampscaffold17790133620 Phenylpropanoid CCR low borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
BOampscaffold17790133630 Phenylpropanoid CCR low borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
BOampscaffold1790136360 Phenylpropanoid CCR low borderline CCR__00006__sp_Q6K9A2_CCR1_ORYSJ
BOampscaffold1910143210 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
BOampscaffold19960155390 Phenylpropanoid CCR medium borderline CCR__00004__sp_G7JEE5_CCR2_MEDTR
BOampscaffold19960155400 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
BOampscaffold2090168640 Phenylpropanoid CCR low borderline CCR__00006__sp_Q6K9A2_CCR1_ORYSJ
BOampscaffold2230181540 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
BOampscaffold2620211320 Phenylpropanoid CCR medium pass CCR__00006__sp_Q6K9A2_CCR1_ORYSJ
BOampscaffold2850227130 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
BOampscaffold2870229160 Phenylpropanoid CCR low borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
BOampscaffold2890230070 Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
BOampscaffold3230259160 Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
BOampscaffold3680285470 Phenylpropanoid CCR medium borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
BOampscaffold3740291540 Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
BOampscaffold3750291900 Phenylpropanoid CCR medium pass CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
BOampscaffold3750291910 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
BOampscaffold3980302750 Phenylpropanoid CCR medium borderline CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
BOampscaffold39840307200 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
BOampscaffold450322550 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
BOampscaffold460329960 Phenylpropanoid CCR medium pass CCR__00001__sp_A0A059TC02_CCR1_PETHY
BOampscaffold460330080 Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
BOampscaffold50359860 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
BOampscaffold50362070 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
BOampscaffold6480391960 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
BOampscaffold6480391970 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
BOampscaffold6480392060 Phenylpropanoid CCR medium pass CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
BOampscaffold7430405390 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
BOampscaffold74600407240 Phenylpropanoid CCR medium pass CCR__00001__sp_A0A059TC02_CCR1_PETHY