PlantSME Plant secondary metabolism enzyme database

Bonia amplexicaulis (bonia_amplexicaulis)

Imported from atlas release summary for Bonia amplexicaulis.

2193
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 621 20 BAHD (247) View species results
Phenylpropanoid pathway 530 12 POD (270) View species results
Alkaloid pathway 443 24 7DLGT (85) View species results
Flavonoid pathway 283 12 UFGT (173) View species results
Rosmarinic acid pathway 196 7 C4H (82) View species results
Steroid pathway 120 13 SMT1/SMT2/SMT3 (51) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1655 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 469 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
BOampC107200990001540 Alkaloid T16H medium borderline
BOampscaffold100014270 Alkaloid T16H medium borderline
BOampscaffold100016370 Alkaloid T16H medium borderline
BOampscaffold1130047990 Alkaloid T16H medium pass
BOampscaffold12790065060 Alkaloid T16H medium borderline
BOampscaffold12790065080 Alkaloid T16H medium borderline
BOampscaffold14320083740 Alkaloid T16H low borderline
BOampscaffold1610110270 Alkaloid T16H low borderline
BOampscaffold1790135850 Alkaloid T16H medium borderline
BOampscaffold1980153020 Alkaloid T16H medium borderline
BOampscaffold20380158050 Alkaloid T16H medium borderline
BOampscaffold2040158920 Alkaloid T16H medium borderline
BOampscaffold20520162620 Alkaloid T16H medium borderline
BOampscaffold2090169110 Alkaloid T16H medium borderline
BOampscaffold22140178320 Alkaloid T16H medium borderline
BOampscaffold22140178330 Alkaloid T16H medium borderline
BOampscaffold23910195300 Alkaloid T16H medium borderline
BOampscaffold2590208770 Alkaloid T16H medium pass
BOampscaffold2870229600 Alkaloid T16H medium borderline
BOampscaffold31680256240 Alkaloid T16H medium borderline
BOampscaffold350276100 Alkaloid T16H medium borderline
BOampscaffold3980303030 Alkaloid T16H medium borderline
BOampscaffold4340318090 Alkaloid T16H medium borderline
BOampscaffold450325510 Alkaloid T16H medium borderline
BOampscaffold50070365730 Alkaloid T16H medium borderline
BOampscaffold50361080 Alkaloid T16H medium borderline
BOampscaffold530370800 Alkaloid T16H medium borderline
BOampscaffold580383450 Alkaloid T16H medium borderline
BOampscaffold630390940 Alkaloid T16H medium borderline
BOampscaffold6480391880 Alkaloid T16H medium borderline
BOampscaffold70210398840 Alkaloid T16H medium borderline
BOampscaffold9080446960 Alkaloid T16H medium borderline
BOampscaffold930458320 Alkaloid T16H medium borderline
BOampscaffold930460280 Alkaloid T16H medium borderline
BOampscaffold9530464260 Alkaloid T16H medium borderline